Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0361 |
Symbol | |
ID | 8116923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 397949 |
End bp | 398776 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644850750 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_003002730 |
Protein GI | 251788009 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0156033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCGTGA GTCAATCTTT TGCGGTTTTT GGCCATCCTA TCGCGCATAG CAAATCGCCA CGTATTCATT CGCTATTTGC TGAGCAAACG GGAATTTCGC TGACCTACGA GCGCATTCTT GCGCCGTTGG ATGGTTTTGA TAGTAGCCTG AAAATGTTTT TTCAACGTGG TGCATGTGGC GCCAATGTGA CGGCACCATT CAAAGAGCGT GCATGTGCGG CTATGGATGA ATTGAGCGAG CGTGCTCGCT CTGCTGGTGC GGTCAATACG ATTCAAAAGA AAGGTGATGG TTCGCTTTAT GGTGATAATA CCGACGGCAT AGGGCTGCTG AGTGATTTGC AGCAGAATGC ATTTATCCAA CCTCATTATC GGGTGTTGTT GGTCGGGGCG GGTGGTGCTG CACGCGGTGT TATTCAGCCT TTGCTTGCAT ACGGGTGTGA GTTAGTTATC GCTAACCGAA CATTTGCCAG AGCTGGCGCG CTGGCTGAGC ATTTTGGCCG TTACGGTCAG GTGAGTGCGT TGTCGATGGA TGCATTAAGT GACCATCGTT TTGATTTGAT TATCAATGCT ACGTCATCAG GGGTAATGGG CGATATCCCT GATCTACCTG TGTCTCTGAT TTCTCCTGAT GTATGTTGCT ATGACATGTT TTATCAGGCC GAGCCGACTC CTTTTTTGAC GTGGTGTATC CAACAAGGGG CACAACGGTA TGTTGATGGA ATGGGAATGT TGGTCTGGCA GGCGGCACAT GCGTTCAGTT TGTGGCACGG TATCATGCCG GACGCTGTGC CGGTAATTCG TAAAATGAAG CAGGAACTGG GGGAATGA
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Protein sequence | MPVSQSFAVF GHPIAHSKSP RIHSLFAEQT GISLTYERIL APLDGFDSSL KMFFQRGACG ANVTAPFKER ACAAMDELSE RARSAGAVNT IQKKGDGSLY GDNTDGIGLL SDLQQNAFIQ PHYRVLLVGA GGAARGVIQP LLAYGCELVI ANRTFARAGA LAEHFGRYGQ VSALSMDALS DHRFDLIINA TSSGVMGDIP DLPVSLISPD VCCYDMFYQA EPTPFLTWCI QQGAQRYVDG MGMLVWQAAH AFSLWHGIMP DAVPVIRKMK QELGE
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