Gene Dd1591_0340 details

Gene Information

• Locus tag: Dd1591_0340
• Symbol: rpsE
• ID: 8116902
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 383874
• End bp: 384374
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 644850729
• Product: 30S ribosomal protein S5
• Protein accession: YP_003002709
• Protein GI: 251787988
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000106255
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCACA TCGAAAAACA AGCTGGCGAA CTGCAGGAAA AGCTGATCGC GGTAAATCGC 
GTATCTAAAA CCGTTAAGGG TGGTCGTATT TTCTCCTTCA CAGCGCTGAC TGTGGTAGGT 
GATGGTAACG GTCGCGTAGG TTTTGGTTAC GGTAAAGCAC GCGAAGTTCC GGCAGCGATC 
CAGAAAGCGA TGGAAAAAGC CCGTCGCAAT ATGATGAATG TCGCGCTGAA CAACGGCACT 
CTGCAGCACC CGGTTAAAGG TGCGCACACA GGTTCTCGTG TGTTCATGCA GCCAGCTTCC 
GAAGGTACCG GTATCATCGC CGGTGGTGCA ATGCGCGCCG TTCTGGAAGT TGCAGGGGTT 
CACAACGTAT TGGCTAAAGC CTATGGTTCC ACAAACCCGA TTAACGTGGT TCGTGCAACT 
ATCGATGGCC TGGCTAACAT GAAGTCCCCG GAAATGGTCG CTGCCAAGCG TGGTAAATCC 
GTTGAAGACA TTCTGGGGTA A 

 

Protein sequence

MAHIEKQAGE LQEKLIAVNR VSKTVKGGRI FSFTALTVVG DGNGRVGFGY GKAREVPAAI 
QKAMEKARRN MMNVALNNGT LQHPVKGAHT GSRVFMQPAS EGTGIIAGGA MRAVLEVAGV 
HNVLAKAYGS TNPINVVRAT IDGLANMKSP EMVAAKRGKS VEDILG