| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0339 |
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| Symbol | rplR |
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| ID | 8116901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 383506 |
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| End bp | 383859 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644850728 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_003002708 |
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| Protein GI | 251787987 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000109258 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAAGA AATCAGCTCG TATCCGTCGT GCAACCCGCG CACGTCGCAA AATCCGTGAA
TTGGGTGCGA CTCGTCTGGT GGTACATCGT ACCCCCCGCC ATATTTATGC GCAGGTTATC
GCACCGAACG GTTCTGAAGT CCTGGTAGCC GCTTCTACTG TAGAAAAAGC TATCGCTGAG
CAACTGAAGT ATACCGGTAA CAAAGACGCA GCCGCAGCTG TTGGTAAAGC TGTTGCTGAA
CGCGCTCTGG AAAAAGGCAT CAAGGGTGTG GCCTTTGACC GTTCCGGGTT CCAATATCAT
GGTCGAGTCC AGGCACTGGC AGATGCTGCC CGTGAAGCTG GCCTTCAGTT CTAA
|
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| Protein sequence | MDKKSARIRR ATRARRKIRE LGATRLVVHR TPRHIYAQVI APNGSEVLVA ASTVEKAIAE
QLKYTGNKDA AAAVGKAVAE RALEKGIKGV AFDRSGFQYH GRVQALADAA REAGLQF
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