| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0335 |
|---|
| Symbol | |
|---|
| ID | 8116897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 381665 |
|---|
| End bp | 382204 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644850724 |
|---|
| Product | ribosomal protein L5 |
|---|
| Protein accession | YP_003002704 |
|---|
| Protein GI | 251787983 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0094] Ribosomal protein L5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000137819 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAC TGCATGATTA CTACAAAGAC GAAGTGGTTA GCAAACTGAT GACTCAGTTC
AGCTACAATT CTGTCATGCA AGTCCCTCGG GTCGAGAAGA TCACCCTGAA CATGGGTGTT
GGTGAAGCGA TCGCTGACAA GAAGCTGCTG GATAACGCCG CAGCTGATTT GACAGCTATC
TCCGGTCAAA AACCGTTGAT CACCAAAGCA CGCAAATCTG TTGCAGGCTT CAAAATCCGC
CAGGGCTATC CGATCGGCTG TAAAGTAACT CTGCGTGGCG AACGCATGTG GGAGTTCTTT
GAGCGTCTGA TTACCATTGC TGTACCGCGT ATCCGCGACT TCCGCGGTCT GTCTTCGAAA
TCATTCGATG GACGTGGTAA CTACAGCATG GGTGTGCGTG AGCAGATCAT CTTCCCGGAA
ATCGACTATG ACAAGGTCGA TCGCGTTCGT GGTTTGGACA TTACCATTAC CACCACTGCG
AAATCCGATG ATGAAGGCCG TGCGCTGTTG GCCGCCTTTA ACTTCCCGTT CCGCAAGTAA
|
|---|
| Protein sequence | MAKLHDYYKD EVVSKLMTQF SYNSVMQVPR VEKITLNMGV GEAIADKKLL DNAAADLTAI
SGQKPLITKA RKSVAGFKIR QGYPIGCKVT LRGERMWEFF ERLITIAVPR IRDFRGLSSK
SFDGRGNYSM GVREQIIFPE IDYDKVDRVR GLDITITTTA KSDDEGRALL AAFNFPFRK
|
|---|
| |