| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0306 |
|---|
| Symbol | |
|---|
| ID | 8116868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 362187 |
|---|
| End bp | 363230 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644850695 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003002675 |
|---|
| Protein GI | 251787954 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.728671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCA CGTCTTTTCG GTTGCCGCCG GTCGCCGAGT TATCCATCGG GCACCGGGGG
GTTCTGGCTG CCGCCGCATC GGGGCTGACC GACTTCATCG GTGAAAAAGG CGGCGATGCG
GATCGCATTC TTGGCATCAG CGGTATTGAC CCGGAAATGC TGGCCTGCCC GACGCTTAGC
GTCGGACTGG TGAATTATTG CCGGGTGCTG GAAGAGGCGG CCCGTTATTC TGACTGCGAT
AATTTCGGGT TGCACTACGG GCGGCAATTC AAACCGCAGG CGTTGGGGTT GATAGGCTAT
GTTGGGTTAT GCAGTGCCAC TCTGGAGCAG GCATTGCATA ACGTAGTCAA TGCCTTTCCC
TTTCACCAGC ACGATACGCT GATTCGCCTG GTGGACAAGG GCGACTGCTG GCGTTTTGAT
TATCAGGTAC GCCACGGCGC TATCCTGCAT TGTCGCCAGG ATGCGGAACT GACGTTGGGG
ATGATGTTAA ACCTGATTCG CCATGCGGCA GGAAAGAACT GGGCGCCGCG GGAAGTTCAT
TTTGAACATC CGCGCCCCGA GCAGTGGCAC GAGCACTGCA AAGCGTTTGA TGCGCCGGTG
TATTTTGACC AGCCGTTCAA TTCGTTGCTG ATCCCGAAAC GGGACCTGAT GCGCGCCATG
CCGGATCATG ACCCGTTGCT ATTACTGGTG GTGCAGGATG CCCTGTGCCG GCTTAACAAC
GATGCCCCCC AGCAAAGCGT GGTGGATCTG GCGCGCGCCC GGTTGCGCCA GGTGTTGCCG
CAAGGTGAAC CGGCGCTGGA AGAAGTCGCG GAGAATATCG GTTTATCGAG CTGGTCGCTG
CAACGTCGCC TGAAAGAAGA AGGCATGACT TTCACTCAGT TGGTGGAGAA AGTGCGTTGC
GAGATGGCAA CCCATTATTT GCGGCAACGC CAGTTGTCGA TTTCCGAGAT GGCATTCCTG
CTGGGCTACT CTGAAGTCAG CGCGTTTTCC CGGGCCTTCC GCCGCTGGTT TGGCATCAGC
CCGCGGCAGT GGCGCAAAGC ATAA
|
|---|
| Protein sequence | METTSFRLPP VAELSIGHRG VLAAAASGLT DFIGEKGGDA DRILGISGID PEMLACPTLS
VGLVNYCRVL EEAARYSDCD NFGLHYGRQF KPQALGLIGY VGLCSATLEQ ALHNVVNAFP
FHQHDTLIRL VDKGDCWRFD YQVRHGAILH CRQDAELTLG MMLNLIRHAA GKNWAPREVH
FEHPRPEQWH EHCKAFDAPV YFDQPFNSLL IPKRDLMRAM PDHDPLLLLV VQDALCRLNN
DAPQQSVVDL ARARLRQVLP QGEPALEEVA ENIGLSSWSL QRRLKEEGMT FTQLVEKVRC
EMATHYLRQR QLSISEMAFL LGYSEVSAFS RAFRRWFGIS PRQWRKA
|
|---|
| |