| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0266 |
|---|
| Symbol | |
|---|
| ID | 8118588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 319401 |
|---|
| End bp | 320405 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644850657 |
|---|
| Product | tryptophanyl-tRNA synthetase |
|---|
| Protein accession | YP_003002637 |
|---|
| Protein GI | 251787916 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.456262 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGC CCATTGTATT TAGCGGCGCA CAGCCGTCAG GCGAGTTGAC CATTGGTAAC
TACATGGGTG CGTTACGTCA GTGGGTCAAT ATGCAGGATG ATTTTCACTG CATCTATTGC
ATCGTCGATC AGCACGCGAT CACTGTACGT CAGGATCCGC AGCAATTACG CAAGGCGACG
CTGGATACGC TGGCGCTTTA TCTGGCCTGT GGCATCGACC CGCAAAAGAG CACGATTTTC
GTTCAGTCGC ATGTGCCGGA ACACGCACAG TTGAGCTGGT TGCTGAACTG CTACACCTAT
TTCGGCGAGC TGAGCCGCAT GACCCAATTC AAGGACAAGT CCGCCCGTTA TGAGGAAAAC
ATCAACGCCG GGCTGTTCGA CTATCCGGTC CTGATGGCGG CCGATATCCT GCTGTATCAA
ACCAATCAGG TGCCGGTGGG TGAAGATCAG AAACAGCATC TGGAACTCAG CCGGGATATC
GCCCAGCGCT TCAACGCGAT TTACGGCGAC GTTTTCCGTG TGCCGGAGCC GTTTATTCCT
AAATCCGGCG CACGGGTGAT GTCCCTGCTG GAGCCCACCA AAAAGATGTC CAAGTCGGAT
GATAACCGTA ATAACGTCAT CGGGTTGCTG GAAGACACGA AATCGGTGGT GAAGAAGATC
AAACGTGCGG TAACCGATTC CGACGAGCCG CCGGTGGTGC GCTACGATCA GCAAAACAAG
GCGGGAGTTT CCAACCTGCT GGATATTCTC TCCGGGGTGA CGGGGAAATC CATCCCCGAC
CTGGAGAAAG AGTTTGAAGG GCAGATGTAT GGTCACCTGA AAGGCGCGGT AGCCGATGCC
GTATCCGGTA TGTTGAGCGA GTTGCAGGCG CGTTATCACC GCTTCCGTGA TGATGAAGCG
TTCTTGCAGC AGGTGATGCG CGATGGCGCG CAAAAAGCCA GCGCGCGTGC GCAGGAAACG
CTGCGTAAGG TGTATGACGT GGTGGGATTT GTCGCACGTC CGTAA
|
|---|
| Protein sequence | MSKPIVFSGA QPSGELTIGN YMGALRQWVN MQDDFHCIYC IVDQHAITVR QDPQQLRKAT
LDTLALYLAC GIDPQKSTIF VQSHVPEHAQ LSWLLNCYTY FGELSRMTQF KDKSARYEEN
INAGLFDYPV LMAADILLYQ TNQVPVGEDQ KQHLELSRDI AQRFNAIYGD VFRVPEPFIP
KSGARVMSLL EPTKKMSKSD DNRNNVIGLL EDTKSVVKKI KRAVTDSDEP PVVRYDQQNK
AGVSNLLDIL SGVTGKSIPD LEKEFEGQMY GHLKGAVADA VSGMLSELQA RYHRFRDDEA
FLQQVMRDGA QKASARAQET LRKVYDVVGF VARP
|
|---|
| |