Gene Dd1591_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_0260 
Symbol 
ID8118582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand+ 
Start bp314007 
End bp314576 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content50% 
IMG OID644850651 
ProductShikimate kinase 
Protein accessionYP_003002631 
Protein GI251787910 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0179047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGGC GGGTTATCAT TAACGAATTT CTTAGTAATA CCAAAAAAAT GGCAGAGAAA 
CGCAATATCT TTCTGGTTGG GCCGATGGGT GCCGGCAAAA GCACTATTGG CCGTCAGTTA 
GCTCAGCAGC TCAATATGGA ATTCTTCGAC TCCGATCAAG AAATTGAGCG ACGTACCGGG 
GCTGATGTGG GCTGGGTATT TGATGTGGAA GGCGAGGAAG GCTTCCGCGA GCGCGAAGAG 
AAAGTCATTA ATGAATTGAC GGAAAAGCAG GGTATCGTGC TGGCAACGGG CGGTGGTTCG 
GTGAAATCAC GCGAAACCCG CAATCGTCTG TCTGCACGTG GCGTGGTGGT GTATCTGGAA 
ACCACGATTG AAAAACAGTT GGCCCGTACT CAACGAGATA AAAAACGTCC GTTGCTTCAG 
GTTGAAACCC CACCACGCGA AGTGCTGGAG GCATTGGCGA AAGAGCGTAA TCCGCTGTAT 
GAAGAAATCG CCGATGTTAC GATTCGCACC GATGAACAAA GCGCCAAAGT CGTTGCCAAC 
CAGATCATCA GTATGCTGGA AAACAACTGA
 
Protein sequence
MAGRVIINEF LSNTKKMAEK RNIFLVGPMG AGKSTIGRQL AQQLNMEFFD SDQEIERRTG 
ADVGWVFDVE GEEGFREREE KVINELTEKQ GIVLATGGGS VKSRETRNRL SARGVVVYLE 
TTIEKQLART QRDKKRPLLQ VETPPREVLE ALAKERNPLY EEIADVTIRT DEQSAKVVAN 
QIISMLENN