| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0250 |
|---|
| Symbol | |
|---|
| ID | 8118572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 303011 |
|---|
| End bp | 303715 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644850641 |
|---|
| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
|---|
| Protein accession | YP_003002621 |
|---|
| Protein GI | 251787900 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCCG AACTGAACTG GAATGAGATC GATACCGTTT TGCTGGATAT GGACGGTACG
CTGCTCGACC TCGCGTTTGA CAGCTATTTC TGGCTGCAAT TAGTGCCGGA ATCACTCAGC
CGTCAGCGTG ATATCAGCCT GGATCAGGCG CAGCAGTTGA TTGCGGTGGA ATATCAGGCG
GTGCGTCATA CCCTCAACTG GTACTGCTTT GACTACTGGA GCGAGCGACT GAGTCTGGAT
ATTCACCAGA TGACCAGCGA TATTGGTCAC CGCGCTCGCC TGCGCGACGA CACCGCACCG
TTTTTGCACG CACTGCGCAG AAGCGGTCGC CGGACTATTC TGCTGACCAA TGCTCATCCG
CATGGCCTGT CGGTCAAAGT CGCCCATACC GGGCTGGATA GACACCTTGA TTTATTGCTT
TCCACCCATA CTTATGGGTA TCCCAAAGAA GATCAGCGTT TATGGCAGGC GGTGCAGGCG
GAAACCGGGT TTAATCCGGA ACGCACGCTG TTTGTGGATG ACAGCGAGCC GATACTGGAT
GCCGCCAGAG CTTTTGGCAT CCGCTATTGT CTGGGCGTCA GTAATCCTGA CTCGACCAAC
CCGCAGGAAA ACCGCTTCCG GCAACACCCG TCGATGAACG ACTACCTGGC GCTGCTACCG
GGCATTCACC AGTCGGTTCC TGTCGGTAAT CAGGAGTGCT CATGA
|
|---|
| Protein sequence | MNPELNWNEI DTVLLDMDGT LLDLAFDSYF WLQLVPESLS RQRDISLDQA QQLIAVEYQA
VRHTLNWYCF DYWSERLSLD IHQMTSDIGH RARLRDDTAP FLHALRRSGR RTILLTNAHP
HGLSVKVAHT GLDRHLDLLL STHTYGYPKE DQRLWQAVQA ETGFNPERTL FVDDSEPILD
AARAFGIRYC LGVSNPDSTN PQENRFRQHP SMNDYLALLP GIHQSVPVGN QECS
|
|---|
| |