| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0187 |
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| Symbol | uvrD |
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| ID | 8117149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 225567 |
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| End bp | 227729 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644850579 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_003002559 |
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| Protein GI | 251787838 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.276236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTTT CTGACCTGCT CGACAGTCTG AATGATAAAC AGCGTGACGC CGTGGCGGCG
GCGCGCAGTA ATATGCTGGT ACTGGCTGGC GCAGGCAGTG GCAAAACCCG CGTTCTGGTG
CACCGTATCG CCTGGTTGCT GACGGTGGAA AACTGCTCGC CGTATTCGAT CATGGCGGTG
ACTTTTACCA ACAAAGCGGC GGCGGAAATG CGCCACCGTA TCGATCAGCT ACTCGGCACC
AGTCAGGGCG GGATGTGGAT CGGCACCTTC CACGGGCTGG CGCACCGTCT GCTGCGTGCG
CACCATCTGG ATGCCGGTTT ACCGCAGGAT TTCCAGATTC TGGACAGCGA AGATCAATTG
CGGTTGCTCA AGCGCCTGAT TAAGGCGCTG AATCTGGATG AGAAACAGTG GCCGCCCCGT
CAGGCGATGT GGTACATCAA CGGCAAGAAA GACGAAGGGC TGCGCCCGCA ACATATCGAC
AGCTACGGCA ACCCGGTGGA ACAGACCTGG CTGCGCATCT ATCAGGCTTA TCAGGAAGCT
TGCGATCGCG CCGGGTTGGT GGATTTTGCC GAACTGCTGC TGCGCGCTCA TGAGCTGTGG
CTCAACAAAC CGCATATTCT CCAGCATTAT CGCGACCGTT TTAACAACAT TCTGGTGGAT
GAGTTTCAGG ATACCAACCG TATTCAGTAT GCCTGGATTC GCTTGTTGGC AGGCGACAGC
GCCAAAGTGA TGATCGTCGG CGACGACGAC CAGTCGATCT ACGGCTGGCG TGGAGCGCAG
GTGGAGAATA TTCAGCACTT CCTGCGCGAT TTCAATGACG TGACGACCAT CCGTCTGGAG
CAAAATTACC GTTCCACCGC CAATATTCTC AATGCCGCCA ACGCGTTGAT TGCCCACAAC
GGCGATCGAC TGGGTAAGAA CCTGTGGACC GACGGCATTG AGGGCGAGCC GATTTCGCTC
TACTGCGCGT TTAACGAACT GGACGAAGCG CGGTTTGTGG TCAACCGCAT CAAGGTGTGG
CAGGAAGCGG GCGGGGCGCT CAGCGAATGC GCCATTCTCT ATCGCAGCAA CGCCCAGTCG
CGCGTACTGG AAGAGGCGTT GTTGCAGCAA AGCCTGCCGT ATCGGATTTA TGGCGGTATG
CGCTTCTTCG AACGGCAGGA AATCAAGGAC GCGCTGTCTT ATCTGCGTTT GCTGACCAAC
CGCAACGACG ATGCGGCCTT TGAGCGTGTG GTGAATACCC CGACGCGCGG CATCGGCGAT
CGCACCCTGG ACGTGGTACG CCAGACGGCC CGCGACCGCC AGTTGACGTT ATGGCAGGCG
ACGCGCGCGT TGTTGCAGGA AAAAGTATTG GCCGGGCGCG CCGCCGCGGC ATTACAACGC
TTTCTGGAAC TGGTGGATGC GCTCGCCAGC GACACCGCCG ATTTACCGCT GCATGTGCAA
ACCGACCGGG TGATTCGTGA TTCCGGGTTG TGGAGCATGT ACGAGCAAGA AAAAGGTGAA
AAGGGCCAGA CTCGGGTGGA AAACCTGGAG GAACTGGTGA CGGCGACCCG CCAGTTCAGC
TATCAGGATG AAGATCAGGA TTTGCTGCCG TTGCAGGCGT TTTTGTCTCA CGCCGCGCTG
GAAGCCGGCG AAGGGCAAGC GGACGCCTAT CAGGACGCGG TGCAACTGAT GACGCTGCAC
TCCGCCAAAG GGCTGGAGTT CCCGCAGGTG TTCGTCGTCG GTATGGAAGA GGGGATGTTC
CCCAGCCAGA TGTCGTTGGA TGAAGGCGGC CGTCTGGAAG AGGAGCGTCG GCTGGCTTAT
GTCGGCGTGA CGCGGGCGAT GCAGAAACTG ACGCTGACTT ACGCCGAAAG CCGCCGGTTA
TACGGTAAAG AGGCTTACCA CCGTCCGTCA CGCTTCATCG GCGAACTGCC GGTCGAATGT
GTGGAAGAGG TGAGGTTGCG CGCCAGCGTT TCGCGCCCGG TCAATCATCA GCGATTGGGA
ACGCCGGTCA GCCAGAGCGA CACCGGGTAT AAGCTGGGGC AACGGGTGCG CCACGCCAAG
TTCGGCGAAG GTACTATCGT TAACGTGGAA GGCAGCGGCG AACACTGCCG TATTCAGGTG
GCGTTTGCCG GTCAGGGTAT CAAATGGCTG GTGGCGGCTT ACGCCCGTCT GGAGGCGGTC
TAG
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| Protein sequence | MDVSDLLDSL NDKQRDAVAA ARSNMLVLAG AGSGKTRVLV HRIAWLLTVE NCSPYSIMAV
TFTNKAAAEM RHRIDQLLGT SQGGMWIGTF HGLAHRLLRA HHLDAGLPQD FQILDSEDQL
RLLKRLIKAL NLDEKQWPPR QAMWYINGKK DEGLRPQHID SYGNPVEQTW LRIYQAYQEA
CDRAGLVDFA ELLLRAHELW LNKPHILQHY RDRFNNILVD EFQDTNRIQY AWIRLLAGDS
AKVMIVGDDD QSIYGWRGAQ VENIQHFLRD FNDVTTIRLE QNYRSTANIL NAANALIAHN
GDRLGKNLWT DGIEGEPISL YCAFNELDEA RFVVNRIKVW QEAGGALSEC AILYRSNAQS
RVLEEALLQQ SLPYRIYGGM RFFERQEIKD ALSYLRLLTN RNDDAAFERV VNTPTRGIGD
RTLDVVRQTA RDRQLTLWQA TRALLQEKVL AGRAAAALQR FLELVDALAS DTADLPLHVQ
TDRVIRDSGL WSMYEQEKGE KGQTRVENLE ELVTATRQFS YQDEDQDLLP LQAFLSHAAL
EAGEGQADAY QDAVQLMTLH SAKGLEFPQV FVVGMEEGMF PSQMSLDEGG RLEEERRLAY
VGVTRAMQKL TLTYAESRRL YGKEAYHRPS RFIGELPVEC VEEVRLRASV SRPVNHQRLG
TPVSQSDTGY KLGQRVRHAK FGEGTIVNVE GSGEHCRIQV AFAGQGIKWL VAAYARLEAV
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