| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0178 |
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| Symbol | hemD |
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| ID | 8117140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 217067 |
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| End bp | 217807 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644850570 |
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| Product | uroporphyrinogen-III synthase |
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| Protein accession | YP_003002550 |
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| Protein GI | 251787829 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0118658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGATTC TGGTTACCCG TCCCTCTCCT GCGGGTGAGC AGCTGGTAGC CCGTCTCAGA
ATGGCAGGCC TGCCGGCCTA CCACAGTCCG TTAATCGAAT TTTCTCCGGG CGACGAATTG
CCGCAATTGC CTGCCATGTT ACAGGCGCTA CGCCCCGGTG ATTTAGTCTT CGCCTTATCG
CAACAAGTCG TGGAATATGC CGATCCGGCG CTGTCACGCG CTGGAATGCG CTGGCCGGAG
TCACTCACCT ACTTTGCGGT AGGGCGCTCT ACCGGGCTGG CTTTGCATAC CGTCAGCGGT
TTGCCGGTAC ACTACCCGCC GGAACGCGCA ACCAGCGAAA CATTATTGCA ATCCCCGGAG
TTACAACAGG TAACGGGTAA GCAGGCGTTG CTGCTGCGCG GTAATGGCGG GCGGGAACTG
CTCGGCGAAA CCTTGCAGCA ACGCGGCGCG CAGGTGCGCT ACTGCGAATG TTATCAGCGT
AACCCGGTGG TCTACGACGG CGCGGAACAA TGTCAGCGCT GGCAACGCCT CGGTATCGAT
ACGCTGGTGA TCACCAGCGG AGAAATGCTG CAACAGTTCT ATACTTTGGT GCCTGATTAT
TATCGCACGA CCTGGCTGAC GGGTTGCCGG GTCGTGGTGG TTAGCGAACG CCTGGCCGGC
GTGGCCCGCG AGTTAGGCTG GCGCGATATT TTGATCGCCG ATAACGCGGA CAACGATGCG
CTGATGCGCG CGCTACAGTG A
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| Protein sequence | MTILVTRPSP AGEQLVARLR MAGLPAYHSP LIEFSPGDEL PQLPAMLQAL RPGDLVFALS
QQVVEYADPA LSRAGMRWPE SLTYFAVGRS TGLALHTVSG LPVHYPPERA TSETLLQSPE
LQQVTGKQAL LLRGNGGREL LGETLQQRGA QVRYCECYQR NPVVYDGAEQ CQRWQRLGID
TLVITSGEML QQFYTLVPDY YRTTWLTGCR VVVVSERLAG VARELGWRDI LIADNADNDA
LMRALQ
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