| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0152 |
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| Symbol | |
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| ID | 8117110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 185183 |
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| End bp | 186991 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644850540 |
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| Product | glycoside hydrolase family 28 |
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| Protein accession | YP_003002524 |
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| Protein GI | 251787803 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.533709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAA TTTCCCGGCG TCATGCTCTG GCGTCGCTGG TATCGGTATG CCTGTTCGGC
ACCCCGGCAT TAGCCGCAAC CAGTACGACT CAGGCTCCGC AAAAGTTACA GATCCCTACA
CTCTCTTACG ATGATCACAG CGTGATGCTG GTGTGGGACA CGCCGGAAGA CACGTCCAAC
ATTACCGACT ATCAGATTTA CCAAAATGGC CAGTTGATTG GACTCGCCAG CCAAAACAAT
GACAAAAACT CGCCGGCCAA ACCGTACATC AGCGCGTTCT ACAAAAGTGA CGCCGCGAAT
TTTCACCACC GAATTATCCT GCAAAACGCT AAAGTCGATG GGCTGAAAGC CGGCACCGAT
TATCAGTTTA CCGTTCGTAC GGTCTATGCC GATGGCACAA CTTCGGCCGA CAGCAACACG
GTTACCGCTA CCACCACCGC AGTACCCAAA GTCATCAACA TCACCCAGTA CGGCGCCAAA
GGCGACGGCA CTACGCTCAA TACCAGCGCG ATTCAGAAAG CGATTGACGC CTGCCCAACC
GGTTGCCGTA TCGACGTTCC GGCCGGGGTG TTCAAAACCG GCGCTCTGTG GCTGAAAAGC
GATATGACGC TGAATCTGTT GCAGGGTGCA ACGCTGCTCG GGTCGGACAA TGCGGCCGAC
TATCCCGATG CGTATAAAAT TTATAGCTAC GTCTCGCAGG TACGCCCTGC TTCACTGCTG
AACGCTATCG ATAAAAACAG CTCGGCTGTG GGCACCTTTA AAAACATCCG TATCGTCGGT
AAAGGCATTA TCGACGGCAA CGGCTGGAAA CGCAGTGCGG ATGTCAAAGA TGAACTGGGC
AATACCCTGC CGCAGTACGT GAAGAGTGAT AACAGCAAAG TGAGCAAAGA TGGCATCCTG
GCGAAAAACC AGGTTGCGGC GGCCGTGGCT ACCGGCATGG ATACCAAAAC CGCCTACAGC
CAGCGCCGCT CCAGTTTGGT CACCCTACGC GGCGTCCAAA ACGCTTATAT CGCCGATGTC
ACCATCCGCA ACCCGGCTAA CCACGGCATC ATGTTCCTGG AAAGCGAAAA TGTGGTGGAA
AACGGCGTTA TCCACCAGAC GTTCAATGCC AACAATGGCG ATGGCGTCGA ATTTGGCAAC
AGCCAAAACA TCATGGTATT CAACAGCGTG TTCGATACCG GGGACGATAG CATCAACTTC
GCAGCAGGGA TGGGCCAGGA CGCACAGAAG CAAGAACCTT CGCAAAACGC CTGGTTGTTC
AACAACTTTT TCCGTCACGG CCACGGCGCT GTGGTGTTAG GTAGCCACAC CGGCGCAGGC
ATTGTCGATG TCCTGGCGGA AAACAACGTG ATAACCCAGA ACGATGTGGG TCTGCGCGCC
AAGAGCGCCC CGGCCATCGG CGGCGGCGCA CATGGCATCG TGTTCCGCAA CAGCGCGATG
AAAAACCTGG CCAAACAGGC CGTCATCGTG ACGTTAAGTT ACGCCGACAA CAACGGTACC
ATCGACTATA CCCCGGCCAA AGTGCCCGCA CGATTCTATA ACTTCACCGT CAAAAACGTC
ACCGTGCAGG ACAGCACCGG CTCAAACCCG GCGATTGAGA TCACCGGCGA CAGCAGCAAA
GATATCTGGC ATAGCCAGTT TATCTTCAGC AATATGAAAC TCAGCGGCGT AAGCCCGACG
TCAATTAGCG ACCTGAGCGA CAGCCAGTTC AACAACCTGA CGTTCAGCAA TCTGCGCAGC
GGTTCTTCAC CGTGGAAATT CGGTACCGTG AAAAACGTGA CCGTAGACGG TAAAACCGTT
ACCCCCTGA
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| Protein sequence | MTTISRRHAL ASLVSVCLFG TPALAATSTT QAPQKLQIPT LSYDDHSVML VWDTPEDTSN
ITDYQIYQNG QLIGLASQNN DKNSPAKPYI SAFYKSDAAN FHHRIILQNA KVDGLKAGTD
YQFTVRTVYA DGTTSADSNT VTATTTAVPK VINITQYGAK GDGTTLNTSA IQKAIDACPT
GCRIDVPAGV FKTGALWLKS DMTLNLLQGA TLLGSDNAAD YPDAYKIYSY VSQVRPASLL
NAIDKNSSAV GTFKNIRIVG KGIIDGNGWK RSADVKDELG NTLPQYVKSD NSKVSKDGIL
AKNQVAAAVA TGMDTKTAYS QRRSSLVTLR GVQNAYIADV TIRNPANHGI MFLESENVVE
NGVIHQTFNA NNGDGVEFGN SQNIMVFNSV FDTGDDSINF AAGMGQDAQK QEPSQNAWLF
NNFFRHGHGA VVLGSHTGAG IVDVLAENNV ITQNDVGLRA KSAPAIGGGA HGIVFRNSAM
KNLAKQAVIV TLSYADNNGT IDYTPAKVPA RFYNFTVKNV TVQDSTGSNP AIEITGDSSK
DIWHSQFIFS NMKLSGVSPT SISDLSDSQF NNLTFSNLRS GSSPWKFGTV KNVTVDGKTV
TP
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