Gene Dd1591_0132 details

Gene Information

• Locus tag: Dd1591_0132
• Symbol: btuB
• ID: 8117083
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 152049
• End bp: 153944
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 644850513
• Product: vitamin B12/cobalamin outer membrane transporter
• Protein accession: YP_003002504
• Protein GI: 251787783
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4206] Outer membrane cobalamin receptor protein
• TIGRFAM ID: [TIGR01779] TonB-dependent vitamin B12 receptor

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00107286
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAATA AAAAAATAAC GATGCTGGCG GCGATGATAG CCACGGCTTT TTCAGGATGG 
GCGCAAGGTA GCGACAACAC ACAGCAAAAT AATAATGACG CGATGGTGGT GACCGCCAAC 
CGTTTTCCCC AACCCATTTC CTCTGTACTG GCTCCCACAA CCGTGGTGAC GCGTGATGAT 
ATTGATCGCT GGCAGTCGAA AAATGTGTTG GAGGTGATGA AACGCTTACC CGGTGTGGAC 
ATCTCACAGA ATGGTGGTTT GGGGCAGAGC GCTTCCATTT ATATTCGTGG CTCGGAAGCT 
CGTCATACGC TGGTTCTGAT TGATGGTGTT CCATTGGCTA AACCAGGCAT TACAGGTGTT 
GCTGATTTTA ATCAAATACC GATGTCGCTG GTGCAGCGAA TTGAATTTAT TCGAGGGCCT 
CGCTCTTCCG TTTATGGTGC TGATGCAATT GGTGGTGTTA TCAACATCAT TACACAATCA 
GACAAAAAGG GCGGAACGCT GGAAACGGGT ATAGGAAGCA ATCATTACCA GCAATATAAC 
GGTAGTTTAC GTCAGGCCAT TACCGATAAC ACAACGTTAA CACTGGCGGG AGCATATCAA 
GATACTAAAG GGTTCAATAT TCGCCCAACG TCGACGTATA GCCCGGATAG CGATCGTGAT 
GGTTGGCGCA ATAAATCTTT CTGGGGCGGT GTAGACCATC GTTTTAATGA GCAATGGTCT 
GCTTTTATTC GTGGATATGG TTACGGTTCA AACAGTGACT ATGATGCCGG GTTCGCTAAT 
AGTGCAGATG AACAGCAAGT TTACAATCAT ACTTACAATA CAGGTGTACG TTTTGCGGAA 
GGAGATTTTG CTTCGCAATT GATAGCCAGC TATCAGAAAT ATAATTTCCT CAACTATTTG 
GGTACAGAAG GTAGATACGG TAGTGCCAGC TCTCTTGATA AGATGGAGCA ACGTAATTTG 
CAGTGGGGAA ATACCTATCG TATCGGCCAG GGCATGCTCA GTGCAGGGCT AGACTGGCAG 
CAACAGAAAT TGATTTCTGA AGGCATGAGT TTTAATACTG CGGCCAGAGA ATCTGACGAT 
TATAAGAGAG ATAATACAGG GGTCTATCTG ACCGCTCAGC AGCAAATAAG CTCTGTCACT 
ATTGAAGGCT CTTTGCGTAG TGATGACAAC GAACAATTTG GCCAGCATGG TACCTGGCAA 
ACTGCTGCTG GTTGGGAATT TTTGCCGGAT TATAAGCTGA CGCTTTCTTA TGGGACGGGA 
TTTCAGGCAC CAACCTTAGG GCAAATGTTT GGGCAAAAAC ACAACGATAT TATTTCCAAT 
AAAAACCTGA AGCCCGAAGA ATCCAAACAG TGGGAAGCTG GGCTTGAGGG AGTAACGGGG 
CCTTTGAATT GGCGCTTGTC TGCATATCAT AATGAGGTTA CCAATCTACT CACTTACTCA 
TCAGATCCGG TCACATTTGA GGGCGTTTAT AGCAATATCA AGGCTGCGAC ACTAAAGGGT 
GTTGAATGGA CAGGTCAATT TGATACTGGA ATCTTCAATC ATCAGATTAC GCTTGGCTAT 
CTTGATGCTC GGCGAGATGA AGATAATGAA GTGCTTGCAC GTCGTGCTAA ACAGCAAGCT 
AAATACCGGC TTGGCTGGCA GGTTTTTGAT GTGGATGTTG ATGTCAGTTA CCAATATTTT 
AGTAAACGCT ATGACAACAA TACCAATGAG TTCGCATCCA CTCAGCGTCA GTTACCTAGC 
TATAGTACAG TTGATATCGC AGCGTCATAT CCCGTCACCT CACATCTGAC AGTTCGTGCT 
AGAATAGCCA ACCTGTTCGA TAAGAATTAT GAGACGGCGT ATGGCTACCG AACTGCAGGG 
CGAGAATATT ATCTCACCGG AAGCTATAGT TTCTGA 

 

Protein sequence

MFNKKITMLA AMIATAFSGW AQGSDNTQQN NNDAMVVTAN RFPQPISSVL APTTVVTRDD 
IDRWQSKNVL EVMKRLPGVD ISQNGGLGQS ASIYIRGSEA RHTLVLIDGV PLAKPGITGV 
ADFNQIPMSL VQRIEFIRGP RSSVYGADAI GGVINIITQS DKKGGTLETG IGSNHYQQYN 
GSLRQAITDN TTLTLAGAYQ DTKGFNIRPT STYSPDSDRD GWRNKSFWGG VDHRFNEQWS 
AFIRGYGYGS NSDYDAGFAN SADEQQVYNH TYNTGVRFAE GDFASQLIAS YQKYNFLNYL 
GTEGRYGSAS SLDKMEQRNL QWGNTYRIGQ GMLSAGLDWQ QQKLISEGMS FNTAARESDD 
YKRDNTGVYL TAQQQISSVT IEGSLRSDDN EQFGQHGTWQ TAAGWEFLPD YKLTLSYGTG 
FQAPTLGQMF GQKHNDIISN KNLKPEESKQ WEAGLEGVTG PLNWRLSAYH NEVTNLLTYS 
SDPVTFEGVY SNIKAATLKG VEWTGQFDTG IFNHQITLGY LDARRDEDNE VLARRAKQQA 
KYRLGWQVFD VDVDVSYQYF SKRYDNNTNE FASTQRQLPS YSTVDIAASY PVTSHLTVRA 
RIANLFDKNY ETAYGYRTAG REYYLTGSYS F