Gene Dd1591_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_0111 
Symbol 
ID8117062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand- 
Start bp129652 
End bp130137 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content56% 
IMG OID644850492 
Productribonuclease activity regulator protein RraA 
Protein accessionYP_003002483 
Protein GI251787762 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR01935] RraA famliy
[TIGR02998] regulator of ribonuclease activity A 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.530064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACG ATACTTCCGA ACTGTGTGAT ATCTACCATG AAGAGGTCAA TGTGGTTGAA 
CCTCTTTTCT CCAATTTTGG CGGGCGTAGT TCATTCGGCG GCAAAATCAT CACGGTAAAA 
TGCTTTGAGG ATAACGGCCT GCTGTTCGAC GTGCTGGAAG AAAACGGCAG CGGACGTGTA 
TTGCTGGTGG ATGGCGGCGG TTCCGTGCGC CGGGCGCTGG TTGATGCCGA ACTGGCGCGT 
CTGGCGACAC AGAATGAATG GGAAGGCATC GTGGTCTACG GCGCGGTGCG CCAGGTAGAC 
GACTTGTCGG AACTGGATAT CGGCATTCAG GCGATGGCGG CGACACCGGC GGGCGCCGCC 
AGCGAAGGCA TCGGCGAAAC CGATATTCGG GTGAATTTCG GCGGCGTAAC CTTCTTCTCC 
GGCGATCATC TCTATGCCGA CAACACCGGT ATTATCCTGT CCGAAGATCC GCTGGATCTG 
GAATAA
 
Protein sequence
MKYDTSELCD IYHEEVNVVE PLFSNFGGRS SFGGKIITVK CFEDNGLLFD VLEENGSGRV 
LLVDGGGSVR RALVDAELAR LATQNEWEGI VVYGAVRQVD DLSELDIGIQ AMAATPAGAA 
SEGIGETDIR VNFGGVTFFS GDHLYADNTG IILSEDPLDL E