Gene Dd1591_0080 details

Gene Information

• Locus tag: Dd1591_0080
• ID: 8117031
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 97467
• End bp: 98174
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 644850461
• Product: ABC transporter related
• Protein accession: YP_003002452
• Protein GI: 251787731
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.348241
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGTGC TGGTTCAACT TGATAATGTG CATAAAATTT TTCTTACCGA TGAAATTGAA 
ACTCATGCCC TTAGCAAGAT AAACCTTTCT ATTCACACGG GAGAATACGT CTCTATCGCG 
GGGCCGTCCG GTTGTGGGAA GTCGACGTTG CTGTCCATTA TGGGATTGCT GGATACGCCG 
ACGGAAGGGC AATACCGATT GAACGGCACG GATGTGGAGC GCATCAGCCG CCGGGAGATG 
GCCCGGCTGC GCAACCGGGA AATCGGTTTT ATCTTTCAGT CCTTCAACCT GATAAGCGAT 
TTGACCATCG CGGAAAACGT GGCGCTGCCG CTGACTTACC GTAAAGAGTT GTCGCGTGCT 
GAACAGAAAG CGCGGGTGAT TCAGGCGCTG GAGAAGGTCA ATATGTCGCA TCGCGTACGG 
CATTACCCTT CACAGTTATC CGGTGGGCAG CAGCAACGGG TTGCCGTCGC ACGCGCTATT 
GTCGGCAAAC CGTCGTTATT ACTGGCGGAT GAACCCACCG GTAACCTGGA TTCCGCCAAT 
GCCGAAGCGG TGATGAATAT TCTGGATGAG CTGCATCAGG ACGGCGCGAC CATCTGCATT 
GTTACCCATG ACCCGCGTTC CGCCATGCGC GCTCAGCGTA CCATTGTGCT GTCCGACGGA 
CAGGTCGTGG CCGATGGCGA AAACGGGCAA CTGCGTCAGG CGGTATAA 

 

Protein sequence

MTVLVQLDNV HKIFLTDEIE THALSKINLS IHTGEYVSIA GPSGCGKSTL LSIMGLLDTP 
TEGQYRLNGT DVERISRREM ARLRNREIGF IFQSFNLISD LTIAENVALP LTYRKELSRA 
EQKARVIQAL EKVNMSHRVR HYPSQLSGGQ QQRVAVARAI VGKPSLLLAD EPTGNLDSAN 
AEAVMNILDE LHQDGATICI VTHDPRSAMR AQRTIVLSDG QVVADGENGQ LRQAV