Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0079 |
Symbol | |
ID | 8117030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 96288 |
End bp | 96851 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644850460 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003002451 |
Protein GI | 251787730 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.294253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTAC AGAACACTTT CGCCCACACG TTAGACAATG ATATTTTCAA CAATAATCTG ATTCAGGATA TGTACCGCCG CCACCCTAAC CTGCGAAAAA CACTGGCAGC CAGTAATAAA GCAACCAGCC TGGCGGGAAT TATTGACTAT ATTATCGATA ATATCGGCAA CAATATTACG CTGGAAGATC TTGAAGCCGT CAGCGGTAAA TCAAAATTCG ATATCTGCCG TCTTTTCAAT CAGGTTTATA ACATTACACC GATGCGCTGG ATTTGGCGTG TACGTCTCAC GCTGGCCAAA GAGATCATTC ATATTTCCCC TAACTGGTCG CTTACCGATA TTTGCTACGC CTGCGGTTTT TCCTCACTCC CCCATTTCTC GCGTTGTTTT ACCAAGACAT ACAATATTCC GCCGCTGAAA TACCGCAAAT CGGTTTCACT GGAACGAGAA AACGAGTCAC CCCGAACGCT GCAAAACATG AGTTTCGATA TTATTTTCGG CAAACAGCGT CACCTGTTCT CTCGTCACGT GCTGCTGGAC AATATCCATA ATCTTTGTAA TTGA
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Protein sequence | MSLQNTFAHT LDNDIFNNNL IQDMYRRHPN LRKTLAASNK ATSLAGIIDY IIDNIGNNIT LEDLEAVSGK SKFDICRLFN QVYNITPMRW IWRVRLTLAK EIIHISPNWS LTDICYACGF SSLPHFSRCF TKTYNIPPLK YRKSVSLERE NESPRTLQNM SFDIIFGKQR HLFSRHVLLD NIHNLCN
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