Gene Dd1591_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_0070 
Symbol 
ID8119015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp84008 
End bp84874 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content52% 
IMG OID644850451 
Productcarboxylate/amino acid/amine transporter 
Protein accessionYP_003002442 
Protein GI251787721 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID[TIGR00950] Carboxylate/Amino Acid/Amine Transporter 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATTAA AAGACTTCGC TTTCTATGCC CCTTGCGTCT GGGGCACCAC CTACTTTGTT 
ACGACCCAGT TTCTTCCTGC CGACAAGCCG TTGCTGGCTG CGCTGATTCG TGCGCTGCCG
GCGGGCCTTG TTCTCATTTT CGGTAAAAAG CTCCCGCCGG TCAGCTGGTT ATGGCGATTA
TTTGTGCTAG GGGCACTCAA TATCGGCGTA TTTTTCGTCA TGCTGTTTTT TGCGGCTTAT
CGTCTGCCCG GCGGTGTCGT GGCGCTGGTG GGGTCACTTC AACCGCTTGT CGTCATTCTA
CTGTCTCTCC TGTTGTTGAC GCAGCCGGTG CTGAAAAAAC AGATAATGGC GGCGGTGGCC
GGCGGGATCG GCATTGTCTT GCTGATTTCA TTACCGGAAG AGTCGTTAAA TCCGGCTGGG
CTGGCGGCAT CGGTACTGGC GACGGTGAGT ATGGCGTCGG GGTTGGTGCT GACCAAGAAA
TGGGGCCGCC CGGCCAAAAT GACGATGCTG ACGTTCACCG GCTGGCAGCT ATTCTGTGGC
GGGTTGGTGA TTCTGCCGGT ACAGATGTTT TTGGAGCCGC TGCCGGATGC CATCACCTGG
ACTAACCTCG CCGGTTATTT TTATCTGGCT ATCCCCGGCT CGTTGTTGGC GTATTTTATG
TGGTTTTCCG GTCTTGAGGT TAATTCTCCG GTCATTATGT CGATGTTGGG CTTTCTCAGT
CCAATGGTTG CGTTGTTAGT GGGATTTTTA TTCCTTCACC AGGGGTTGTC CGGTCCACAA
TGGGTGGGTG TGGTACTGAT TTTTTCAGCA ATTATTATTG TGCAGGATAT CTCGTTATTT
TTCAGAAGAA AAAATCAATG CAGTTAA
 
Protein sequence
MKLKDFAFYA PCVWGTTYFV TTQFLPADKP LLAALIRALP AGLVLIFGKK LPPVSWLWRL 
FVLGALNIGV FFVMLFFAAY RLPGGVVALV GSLQPLVVIL LSLLLLTQPV LKKQIMAAVA
GGIGIVLLIS LPEESLNPAG LAASVLATVS MASGLVLTKK WGRPAKMTML TFTGWQLFCG
GLVILPVQMF LEPLPDAITW TNLAGYFYLA IPGSLLAYFM WFSGLEVNSP VIMSMLGFLS
PMVALLVGFL FLHQGLSGPQ WVGVVLIFSA IIIVQDISLF FRRKNQCS