Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0061 |
Symbol | xylF |
ID | 8119006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 73978 |
End bp | 74973 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644850442 |
Product | D-xylose transporter subunit XylF |
Protein accession | YP_003002433 |
Protein GI | 251787712 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATCA AACACGTATT ACTGTCAGCC TGTGCCGCAC TTGTCATGCT GTGTCAGCCG GGGTTCGCCA AAGAGGTTAA AATCGGTATG GCTATCGACG ACCTGCGTCT TGAGCGCTGG CAAAAAGATC GGGATATTTT TGTGAAGAGC GCCGAAGAAA AAGGGGCGAA AGTGTTTGTT CAGTCCGCCA ACGGCAATGA AGGAACGCAA ATATCCCAGA TAGAAAATAT GATTAACCGT GGCGTCGATG TGCTGGTGAT TATCCCTTAT AACGGTCAGG TTTTAAGTAA CGTGATTGCC GAAGCCAAAC GCGAGGGAAT AAAAGTACTG GCTTATGACC GTATGATTAA TAATGCAGAT ATCGATTTTT ACATTTCGTT TGATAATGAA AAAGTCGGAG AGCTTCAGGC ACAATATTTG ATTAATAAAG TGCCGCAGGG CAGTTATTTC CTGATGGGCG GCTCGCCGGT TGATAATAAT GCCAAACTGT TCCGTCAGGG ACAGATGAAA GTATTAAAAC CATTCATTGA TAGCGGCAAG ATTAAGGTCG CGGGCGACCA GTGGGTGGAT GCCTGGCTGC CGGAAAATGC GCTGAAAATC ATGGAAAACG CGCTGACCGC CAACAACAAC AACATTGATG CGGTGGTGGC GTCGAACGAT GCGACCGCGG GCGGTGCGAT TCAGGCGCTC TCCGCTCAGG GCCTGGCCGG CAAGGTGGCG ATATCCGGTC AGGATGCCGA TCTGGCGGCC ATCAAGCGGA TCGTGTCCGG CACTCAGACC ATGACCGTGT ACAAACCGAT TAGCAAACTG GCGCAGGACG CGGCGAATAT CGCGGTGTTG CTGGGACAGG GGAAAAAACC GGAGTCTAAC GCCACGCTCA ATAACGGCAA GAAAGAGGTG CCTGCCTTCT TGCTGACGCC TATCCCGGTC GATAAGGCGA ATATCGATAG CACCGTCGTC GCCGACGGAT TCCATAAGAA AGCGGATATC TATTAA
|
Protein sequence | MKIKHVLLSA CAALVMLCQP GFAKEVKIGM AIDDLRLERW QKDRDIFVKS AEEKGAKVFV QSANGNEGTQ ISQIENMINR GVDVLVIIPY NGQVLSNVIA EAKREGIKVL AYDRMINNAD IDFYISFDNE KVGELQAQYL INKVPQGSYF LMGGSPVDNN AKLFRQGQMK VLKPFIDSGK IKVAGDQWVD AWLPENALKI MENALTANNN NIDAVVASND ATAGGAIQAL SAQGLAGKVA ISGQDADLAA IKRIVSGTQT MTVYKPISKL AQDAANIAVL LGQGKKPESN ATLNNGKKEV PAFLLTPIPV DKANIDSTVV ADGFHKKADI Y
|
| |