| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0045 |
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| Symbol | |
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| ID | 8118990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 50811 |
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| End bp | 54404 |
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| Gene Length | 3594 bp |
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| Protein Length | 1197 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644850426 |
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| Product | urea carboxylase |
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| Protein accession | YP_003002417 |
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| Protein GI | 251787696 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain
[TIGR02712] urea carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAGC GTGTATTGAT TGCCAACCGT GGCGCTATTG CAGTGCGTAT CATCCGCACC
CTGAAAAAAA TGGGCGTGAA AGCCATCGCG GTTTACGCCG AAGCGGACCG TCATTCACAA
CACGTGCGTC AGGCGGATGA AGCCTGGCCG CTGGGCGATG GCCCGGTGCG CGATACCTAC
CTGAATCAGG ACAAATTACT GCACATCGCC GCTCAATGCG GTGCGCAGGC TATTCACCCC
GGCTACGGCT TTTTGAGCGA AAACGCCGGT TTTGTTACCC GCTGTGAACA GGTCGGCCTG
ATATTTCTCG GCCCGACCGT GGCGCAGATG ACCGCGTTCG GCCTCAAACA TCAGGCGCGG
GCGCTGGCAC AACACAACGA CGTGCCGTTG CTGCCCGGCA GCGGCCTGCT CACTTCGCTG
GACAGCGCCT GCGAACAGGC ACAGCGCATC GGTTATCCGG TGATGTTAAA GAGCACCGCG
GGCGGCGGCG GCATCGGTAT GCAGCGCTGC AATGACGAAG ACCAGTTAAT CGATGCGTTT
ACCCGCGTGA AGCGACTGGC AGGCAACAAT TTTGCCGATG ACGGCGTATT TCTGGAAAAA
TTCATCGCTC AGGCCCGTCA CATCGAAGTG CAGGTATTCG GCGACGGCCA GGGCAACGTG
ATAGCCCTTG GCGAGCGCGA CTGCTCCGCC CAGCGTCGCA ACCAGAAAGT GATTGAGGAA
ACGCCGGCTC CCCACCTGAG CGACGGCGTC CGCGCCGAAC TGCAGGCTAC CGCCATCCGG
TTATGTCGGG CGGTTAACTA CCGCAGCGCA GGCACGGTAG AGTATGTGTA CGACGAGAGC
AGCAAACAGT TCTGGTTTCT CGAGGTCAAC ACCCGTCTCC AGGTCGAGCA CGGCGTCACC
GAGCTGGTGT ACGGCGTCGA TATCGTGCAA TGGATGGTGG AGCTGGGCGC GGGTTGCCTG
CCGCCGCTTG ATACGCTCAT CACCCCCCCT CGCGGTCACG CCATTCAGGT ACGGTTATAC
GCTGAAGACC CGGCCAAACA GTTCCAGCCA TGCGCCGGCT TACTGAGTCA CGTCGCTTTT
CCAGACGCGC TGCCCGGCCT GACTCTACGC ATCGACCACT GGCTGGACAG CGGCAGCGAA
GTGTCGCCGT TCTATGACCC AATGCTGGCA AAAATTATCG TGCACGGCGA CAGCCGCGAC
GCCGCCCTCG ACGGTATGGC GCAAGCGCTG GACGCCACAT CGTTGTACGG CATCGAAACC
AATCTTGACT GGCTACGCCA CCTGCTGACC CTGCCGACGG TCAGACGCGG AGAAATCATC
ACTGCGACGC TGGGCGGCGT GGTCTGGCAA CCGGCGACGC TGGATGTCCT TGGCGGCGGC
ACGCTCACCA CCGTGCAGGA TGCCCCCGGC CGCACCGGTT ACTGGCACGT TGGCGTGCCG
CCTTCCGGCC CGTTCGACAC CCGCTCCTTC CGGCTCGGCA ACCAGTTGCT GGGCAACGCG
CCGGACGCCG CCGGACTGGA GATCACCCTG CGTGGGCCGA CGCTGCGTTT CAACCACGAT
TGTGCATTCG TGGTGACCGG CGCCATCATC GACATCCGGC TGGATAACGC CCCGCTCGAT
GGTGGGCGAA TTCACTATGC CCGTACCGGT CAAACGCTCA CACTCGGTGA TGTTCAGGGT
GCCGGTTGCC GCAGCTACCT GTTGCTGGCG GGCGGTCTGG CCTGCCCGGC TTATCTGGGC
AGCCGCAGCA CGTTCACGCT CGGCAAGTTC GGCGGCCATG CCGGGCGGGC GTTACGCGCC
GGCGATGTAC TGCATCTGGC CGCCCCGGCG CTGCCAGCCA CAGACGTCGC TCTGCCGGCG
CCCGACTGGA GCGCACACTG GGCGTTACGG GTGATTTATG GTCCGCACGG CGCACCGGAC
TATTTTACCC CGCAAGACAT CGACACCTTC TTCGCCGCGG ACTGGCAGGT GCATTACAAC
TCCAGCCGCA CCGGTATTCG GCTGATTGGC CCCAAACCCC AGTGGGCACG AACCGACGGC
GGTGAAGCCG GTATGCACCC GTCCAATATC CACGACAACG CCTACGCCTT CGGCACGGTA
GATTTCACCG GCGATATGCC GGTTATTCTG GGGCCGGACG GCCCATCGCT GGGCGGTTTC
GTCTGCCCGG CTACAGTGAT CCACGCCGAT TTGTGGAAAC TCGGCCAGCT CAAAGCAGGC
GACAGTGTCC GTTTTATTCC GGTGACGCCG GAACAAGCGG ACGAACTGGC GCGCGCGGCG
GAATCCGCCA TCACCGCCGG TCTTCCAGTC ACGGAACCAA CCATCGAACC CCATCGCCCG
TCGCCCGTTT TGTACCAACG CCCCGCACAA GACGAGCGAC CATCGGTGAC CTGCCTCGCC
GCCGGCGACC GCTTCCTGTT AGTCGAATAC GGCGAGCACC GGTTGGATAT CGCCCTGCGT
TTTCGCGTGC ACGCGCTGAT GCAGTGGCTG GAACAGCATC CATTGCCGGG CGTGCAGGAG
CTGACGCCGG GTATCCGCTC GCTGCAAATC CATTTCGATA GCCTGCTCTG CCCGCGCAGC
GCGCTGCTGG CGCACCTGCA ACAAGCAGAC GACGCACTCG GCGACTTGCA GCACGCCGCC
GTGCCCTCCC GCACTGTCTG GCTACCGCTC AGTTGGGACG ATGATGCCTG CCGCGAAGCC
ATCACCCGCT ATACCCAATC GGTCAGGCCC GGCGCCCCCT GGTGCCCCAG CAACATCGAA
TTCATCCGCC GTATCAACGG GCTGGATTCG GTAGAGCAGG TCAAAGACAT CGTATTCGAC
GCCCGCTACC TGGTGATGGG GTTGGGCGAC GTCTACCTCG GCGCCCCGGT CGCCACCCCA
CTCGACCCAC GTCACCGTCT GGTCACCACC AAGTACAACC CGGCCCGTAC CTGGACGGCG
GAAAACTCGG TCGGCATCGG CGGCGCGTAT CTGTGTGTAT ACGGCATGGA AGGCCCCGGC
GGCTATCAGT TCGTTGGCCG CACGTTACAG ATGTGGAACC GCGATCGACA AACCGACGCT
TTTCGTCAGC CCTGGTTGCT GCGCTTCTTC GATCAGATTC GCTTTTATCC GGTCAGCGCA
CAGGAACTGC TGACAATTCG TGAACGCTTT CCGTGGGGAG ATTATCCGTT ACGGATTGAA
GACGGGGAGT TTCGCCTCGC CGATTACCAG CGGAGTCTGG CGGAACAACA ACCGGCGATA
GACGCGTTTC AGCAACAACG CCAGCAGGCA TTCGACGAAG AGCTGGCACG CTGGCGCGCC
GACGGCCAGT TCACCTTCGA CAGCAGCCTG CAGGAAATCG CTCCCGACGA TGAGGTGATC
CCTGCTAACG GTTACGGCGT GGAAAGCCAG GTGGCAGGCA GCGTATGGCA GTGGCTGGCC
ACCCCTGGCG ACAACGTCGC CGCCGGGCAA ATCGTCGGTA TTCTGGAATC GATGAAAATG
GAGATCCCGA TTACGGCACC GGTCGCCGGC ATTATCCACA AGATGTACCG TCAGGCGGGG
CAGCAGGTGC AGGCCGGGCA GTTACTGATG GTGATCGAAC CGGCTGACGC CTGA
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| Protein sequence | MFERVLIANR GAIAVRIIRT LKKMGVKAIA VYAEADRHSQ HVRQADEAWP LGDGPVRDTY
LNQDKLLHIA AQCGAQAIHP GYGFLSENAG FVTRCEQVGL IFLGPTVAQM TAFGLKHQAR
ALAQHNDVPL LPGSGLLTSL DSACEQAQRI GYPVMLKSTA GGGGIGMQRC NDEDQLIDAF
TRVKRLAGNN FADDGVFLEK FIAQARHIEV QVFGDGQGNV IALGERDCSA QRRNQKVIEE
TPAPHLSDGV RAELQATAIR LCRAVNYRSA GTVEYVYDES SKQFWFLEVN TRLQVEHGVT
ELVYGVDIVQ WMVELGAGCL PPLDTLITPP RGHAIQVRLY AEDPAKQFQP CAGLLSHVAF
PDALPGLTLR IDHWLDSGSE VSPFYDPMLA KIIVHGDSRD AALDGMAQAL DATSLYGIET
NLDWLRHLLT LPTVRRGEII TATLGGVVWQ PATLDVLGGG TLTTVQDAPG RTGYWHVGVP
PSGPFDTRSF RLGNQLLGNA PDAAGLEITL RGPTLRFNHD CAFVVTGAII DIRLDNAPLD
GGRIHYARTG QTLTLGDVQG AGCRSYLLLA GGLACPAYLG SRSTFTLGKF GGHAGRALRA
GDVLHLAAPA LPATDVALPA PDWSAHWALR VIYGPHGAPD YFTPQDIDTF FAADWQVHYN
SSRTGIRLIG PKPQWARTDG GEAGMHPSNI HDNAYAFGTV DFTGDMPVIL GPDGPSLGGF
VCPATVIHAD LWKLGQLKAG DSVRFIPVTP EQADELARAA ESAITAGLPV TEPTIEPHRP
SPVLYQRPAQ DERPSVTCLA AGDRFLLVEY GEHRLDIALR FRVHALMQWL EQHPLPGVQE
LTPGIRSLQI HFDSLLCPRS ALLAHLQQAD DALGDLQHAA VPSRTVWLPL SWDDDACREA
ITRYTQSVRP GAPWCPSNIE FIRRINGLDS VEQVKDIVFD ARYLVMGLGD VYLGAPVATP
LDPRHRLVTT KYNPARTWTA ENSVGIGGAY LCVYGMEGPG GYQFVGRTLQ MWNRDRQTDA
FRQPWLLRFF DQIRFYPVSA QELLTIRERF PWGDYPLRIE DGEFRLADYQ RSLAEQQPAI
DAFQQQRQQA FDEELARWRA DGQFTFDSSL QEIAPDDEVI PANGYGVESQ VAGSVWQWLA
TPGDNVAAGQ IVGILESMKM EIPITAPVAG IIHKMYRQAG QQVQAGQLLM VIEPADA
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