Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0043 |
Symbol | glyS |
ID | 8118988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 47186 |
End bp | 49270 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644850424 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | YP_003002415 |
Protein GI | 251787694 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGACA AGACATTTTT GGTGGAAATC GGCACCGAAG AGCTGCCGCC GAAAGCTTTG CGTACGCTGG CGGAAGCTTT TGCCGCCAAC TTTACCGCTG AACTGGATGC CGCCGGGCTG GGTTATCAGT CGGTCGGTTG GTTCGCCGCG CCGCGCCGTC TGGCGCTGAA AGTGGCCGGT TTGAGTGCAT CCCAGCCGGA CAGGGAAGTG GAAAAACGTG GCCCGGCCAT CGCGCAGGCG TTTGATGCTG AAGGTAAAGC GACCAAAGCG GCCGAAGGTT GGGCGCGTGG TTGCGGTATC ACCGTCGAGC AGGCTGAACG CCTGACTACC GACAAGGGCG AATGGCTACT GTTCCGCGCG CAGGTGAAAG GTGAGGCGGC GCAGACGCTG CTGCCGGGTA TGGTCAGTAC CGCGCTGGCG AAGCTGCCGA TCCCGAAACT GATGCGCTGG GGCGATAACG ACACCCAGTT TGTGCGCCCG GTACACACCG TGACGCTGCT GTTGGGCGAT GAACTGATCT CCGGCACCGT GCTGGGCATC GATTCCGCCC GCGTGATTCG AGGCCACCGC TTTATGGGCG AGCCGGAATT CACCATCGAT AACGCCGACC AGTACCCGCA GATTCTGCTG GAGCGCGGCA AGGTGCTCGC CGATTACGAG GCGCGTAAAG CCAAAATCAA AGCCGACGCC GAAGACGCGG CGCGCAAGAT TGGCGGCAAT GCCGACTTGA GCGACAGCTT GCTGGAAGAA GTCACCTCGC TGGTGGAATG GCCGGTGGTG CTGACGGCGA AATTTGAAGA GAAATTCCTG GCGGTGCCGG CAGAAGCGCT GGTGTACACC ATGAAAGGCG ACCAGAAATA CTTCCCGGTT TACGACAATG CCGGCAAGCT GCTGCCGAAT TTCATCTTCG TCGCCAACAT TGAATCGAAA GACCCGCAAC AGATCATCGC CGGTAACGAG AAGGTGGTGC GCCCGCGTCT TGCCGACGCC GAATTCTTCT TCAATACCGA CCGTAAAAAA CGCCTGGAAG ATCATCTGCC GCGTCTGGAA ACCGTGCTGT TCCAGCAACA GCTGGGCACG CTGCGCAATA AAACCGATCG TATTGCGGCA CTGACCGGTT GGGTAGCCGA GCAGATCGGC GCCGATGTCA ATCACGCCAA ACGCGCGGGC CTGCTGTCTA AATGCGACCT GATGACCAAC ATGGTGTTTG AATTCACCGA CACCCAGGGT GTGATGGGGA TGCACTACGC CCGTCACGAC GGCGAAGCCG AAGACGTGGC GGTAGCGCTG AACGAGCAGT ATCAGCCGCG CTTTGCCGGT GATGAACTGC CGTCTTCCGC AGTAGCCTGT GCGCTGGCGA TCGCCGACAA GATGGATACG CTGGCGGGGA TTTTCGGCAT CGGTCAGCAC CCGAAAGGCG ATAAAGACCC GTTCGCGTTG CGCCGTGCGG CGCTGGGCGT ACTGCGCATC ATCGTGGAAA AACGCCTGCC GCTGGACTTG CAAACCCTGA CCGAAGAAGC GGTGCGTTTG TACGGCGACA AGCTGAGTAC TATCAATGCA GGGAACGCCA ACGTGGTCGA CGATGTCATC GAGTTCATGT TGGGCCGTTT CCGCGCCTGG TATCAGGAAG AAGGCCACAG CGTGGATACC ATTCAGGCAG TGCTGGCGCG TCGCCCGACT CGCCCGGCGG ATTTCGATGC CCGCGTGAAA GCGGTGAGCC ACTTCCGTAC ACTGGAGCAA GCCGAAGCGC TGGCCGCCGC CAACAAGCGC GTGTCCAACA TTCTGGCTAA GTCCACCGAA ACGCTGAACG ACAGCGTGCA GGCGGCGTTG CTGAAAGAGA ACGAGGAAAT CCAGCTGGCG ACCTACGTTA CCGCGCTGAC CAGCAAGCTG GCACCGTGGT TTGCCGAGGG CCGTTATCAG GAAGCGCTGG CGGAACTGGC ACAGTTGCGT GAGTCAGTCG ATAACTTCTT CGATAAGGTG ATGGTCAACG CCGATGAAGC ACAGGTGCGT ATCAACCGCC TGACGCTGCT CAACGAACTG CGTAACCTGT TCCTGAAAGT CGCGGATATT TCAGTGTTGC AGTAA
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Protein sequence | MTDKTFLVEI GTEELPPKAL RTLAEAFAAN FTAELDAAGL GYQSVGWFAA PRRLALKVAG LSASQPDREV EKRGPAIAQA FDAEGKATKA AEGWARGCGI TVEQAERLTT DKGEWLLFRA QVKGEAAQTL LPGMVSTALA KLPIPKLMRW GDNDTQFVRP VHTVTLLLGD ELISGTVLGI DSARVIRGHR FMGEPEFTID NADQYPQILL ERGKVLADYE ARKAKIKADA EDAARKIGGN ADLSDSLLEE VTSLVEWPVV LTAKFEEKFL AVPAEALVYT MKGDQKYFPV YDNAGKLLPN FIFVANIESK DPQQIIAGNE KVVRPRLADA EFFFNTDRKK RLEDHLPRLE TVLFQQQLGT LRNKTDRIAA LTGWVAEQIG ADVNHAKRAG LLSKCDLMTN MVFEFTDTQG VMGMHYARHD GEAEDVAVAL NEQYQPRFAG DELPSSAVAC ALAIADKMDT LAGIFGIGQH PKGDKDPFAL RRAALGVLRI IVEKRLPLDL QTLTEEAVRL YGDKLSTINA GNANVVDDVI EFMLGRFRAW YQEEGHSVDT IQAVLARRPT RPADFDARVK AVSHFRTLEQ AEALAAANKR VSNILAKSTE TLNDSVQAAL LKENEEIQLA TYVTALTSKL APWFAEGRYQ EALAELAQLR ESVDNFFDKV MVNADEAQVR INRLTLLNEL RNLFLKVADI SVLQ
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