| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0033 |
|---|
| Symbol | |
|---|
| ID | 8118978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 36844 |
|---|
| End bp | 38487 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644850414 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003002405 |
|---|
| Protein GI | 251787684 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGGTT TCTCGAACGC TCGGCAGAAG CGGGGAATGG GTCTGCTTGT TTCATTAGTT
TTGCTAGGGG GTAGCGCGCA GACACAAGCC GCCGATAACG CACCGAAAAC CGGCGGCACG
CTGATCTATC TGGAACAACA GCCGCATACC AATTTGTATC CGCCCGCAGG CGGTTTTTAC
CCCAACGGCG GCATCCTCAA CCAAATCACC GACAAACTGA CCTACCAGAA CCCGGAAACG
CTGAACATCG AGCCCTGGAT CGCCGAATCC TGGACTATCA ACGTCGACAG CACCGAGTAC
ACGTTCAAAC TGCGTCCCGG CGTCACCTTC TCCGACGGCA CGCCGCTGGA TGCCAACGCC
GTCGCTAAAA ATTTCGATAC CTACGGGCTG GGCAACAAGG AACTGAACCA ACCGGTTTCC
GAAGTGATCA ACAACTACCA GCGCAGCGAA GTGATCGACC CGTTGACGGT GAAGTTCTAC
TTCAAAAAAC CGTCGCCCGG CTTTCTGCAA GGCACCGCTG CCATCGGCTC CGGGCTGGTA
TCGCTGAGCA CGCTGGCGCG CAACTTCAAC CAGTTGGGCG ACGCCACCCG CATCATCGGC
TCCGGCCCGT TTGTGGTCAG CAGCGAGAAA CCGGGGCGTG AATTGAAACT GACGGCGCGT
AAGGATTACC ACTGGGCGCC GGCGACATTC ACGCATCAGG GCCGCCCTTA TCTGGACGGC
ATCACCTATC TGGTCACGCC GGAAGACAGC GTACGCATCG GCGCGCTGGT GTCCGGTCAG
GCGGATTTCA TCCGTCAGAT TCAGGCCTAT GACGAAAAAC GGGTGCAGAG CGAAGGCATC
CGCATCTACG CCGCGCCCAC TCGCGGCGTC AACAACAGCG TCAATTTCCG TCCGGATAAT
CCGCTGGTGG CGGACATCCG CGTGCGTCAG GCGCTGCGTT ACGCCACCAA CCCGAAAGAA
ATTATCCAGA CGCTGTATTC CGATAACTAC CCGCAGGCCA CCTCGGTGCT GGCGAAAACC
GCCGCCGGTT ACGTCAACCT GTCCGACAAG CTGACGTTCG ACCCGGCCGC CGCCGCGCGC
CTGCTGGACG ATGCGGGCTG GAAAGCGGGC GCACAGGGCA TCCGCCAAAA AGACGGTCAG
TCGCTGGTGC TGACCGCCTA CGAATCACAA CCGCAGCCGC AGAACAAGGA GATGCTGCAA
CTGGTGGCGC AGCAGTGGGC CAAAGTGGGC GTGAAACTGA ACGTGCTGGC GGGCGACGCG
GGCACCAAAA CCCTCGACAG TCTCGACCCG CTGAAAACCG GTGTGTCGCC GGGCATGGTC
GGCCGTGCCG ATCCGGATGT ACTGAAAAGC CAGTATTACC CGACGCTGCG CAACGTGCTG
CTGCAAAAAG GCGGCGCCAG CGACAAGGTG AAAACCTTTG AAGACACGCA CCTCAACACG
CTGCTGGACG GCATCGCCTC CGCCACCGAT CGCAGTAAAC GGCTGGCGCT GGTGAGCGAG
GTGCAGAACT ACCTGATCGA TCAAGCGTAT GTGATTCCGA TTTTTGAAGA ACCGCAGGTG
TTCGCCGGGC GCGCCACTAC CAAAGGCATT GGCTTCGAAG CCGTAGGCCG CCCCAGTTTC
TACAACACCT GGCTGGACAA GTAA
|
|---|
| Protein sequence | MSGFSNARQK RGMGLLVSLV LLGGSAQTQA ADNAPKTGGT LIYLEQQPHT NLYPPAGGFY
PNGGILNQIT DKLTYQNPET LNIEPWIAES WTINVDSTEY TFKLRPGVTF SDGTPLDANA
VAKNFDTYGL GNKELNQPVS EVINNYQRSE VIDPLTVKFY FKKPSPGFLQ GTAAIGSGLV
SLSTLARNFN QLGDATRIIG SGPFVVSSEK PGRELKLTAR KDYHWAPATF THQGRPYLDG
ITYLVTPEDS VRIGALVSGQ ADFIRQIQAY DEKRVQSEGI RIYAAPTRGV NNSVNFRPDN
PLVADIRVRQ ALRYATNPKE IIQTLYSDNY PQATSVLAKT AAGYVNLSDK LTFDPAAAAR
LLDDAGWKAG AQGIRQKDGQ SLVLTAYESQ PQPQNKEMLQ LVAQQWAKVG VKLNVLAGDA
GTKTLDSLDP LKTGVSPGMV GRADPDVLKS QYYPTLRNVL LQKGGASDKV KTFEDTHLNT
LLDGIASATD RSKRLALVSE VQNYLIDQAY VIPIFEEPQV FAGRATTKGI GFEAVGRPSF
YNTWLDK
|
|---|
| |