| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0032 |
|---|
| Symbol | |
|---|
| ID | 8118977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 35878 |
|---|
| End bp | 36819 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644850413 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003002404 |
|---|
| Protein GI | 251787683 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGATAA GCTATCTGGC GACACGCCTC GGACAGGCGC TGCTGGTGCT GTGGGCGGCA
TTTACCCTGT CATTCATTCT GTTGCAGGCG CTGCCTGGCG ACGCGGTGCT GATCAAATTC
ATGAGTCCGG AGCTGGGGTT AAGCGCCAGC CAGGTAGCCG AACTGCGGTT GGCCTACGGT
GCCGATGTGC CGTTGCTGAC CCAGTACGCG GCGTCGCTGT CGCGCCTGCT GCACGGCGAT
TTCGGCCTGT CGTTGCAGGC CGGGCTGCCG ATCAGCGACT TGTTGGCGAC CAATCTGCCG
CCGACATTGC TGCTGGCGGT GCTGGGGTTC GGTGCGGCGC TGCTGCTGGC GTTTGCGTTG
GCGTTTCTCT CGGCGCTGAC CCCGTTCGCC TGGCTGCGCC AGTTGTTTCA GTCGGCGCCG
TCGCTGCTGA TTTCCATTCC CACTTTCTGG CTCGGTATCG TGCTGATTCA GGTGTTTTCC
TTCCGGCTGG GGTGGATTTC GGTGATCAAC CCCGGCGAGT GGGAAGGGCT GATTCTGCCG
GTGCTGACGC TCTCGGTGCC GATTGCCGCG CCCATCGCCC AGGTGCTGAT GCACAGCATC
GATCAGGTGC TGGCGCAGCC GTTCGTGGCG GTGGCGCGAG CCAAAGGGTT GAGCCGCCGC
GGCGTGCTGT GGCGTCACGT GGCGCGCAAC GCCATGCTGC CGGCGCTGAC GCTGGCGGGC
TTGCTGCTGG GCGAGCTGAT CGCCGGGGCG CTTGTCACCG AAACCGTATT TGGCCGCAGC
GGGCTGGGTC AGTTGACGCA GGAAGCGGTC AACACGCAGG ACGCCAGCGT ATTGCAGGCT
ATCGTGCTGG TGTCAGCAAC GGCATTCGTG GCGGTCAACC TACTGGTCGA TCTGCTCTAC
CCGTTGCTTG ATCCGCGTCT GAAAACCACC CCGGAGGTGT GA
|
|---|
| Protein sequence | MRISYLATRL GQALLVLWAA FTLSFILLQA LPGDAVLIKF MSPELGLSAS QVAELRLAYG
ADVPLLTQYA ASLSRLLHGD FGLSLQAGLP ISDLLATNLP PTLLLAVLGF GAALLLAFAL
AFLSALTPFA WLRQLFQSAP SLLISIPTFW LGIVLIQVFS FRLGWISVIN PGEWEGLILP
VLTLSVPIAA PIAQVLMHSI DQVLAQPFVA VARAKGLSRR GVLWRHVARN AMLPALTLAG
LLLGELIAGA LVTETVFGRS GLGQLTQEAV NTQDASVLQA IVLVSATAFV AVNLLVDLLY
PLLDPRLKTT PEV
|
|---|
| |