Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0025 |
Symbol | |
ID | 8118970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 28518 |
End bp | 29405 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644850407 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003002398 |
Protein GI | 251787677 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGCG AAGACCTTCC CGACCTGATG GCCTTCCTGA TCATCGTCCA GGAAGGTAGC TTCCGAAAAG CGGCAGCGAA ACTGCATGTC TCACCCTCGG GGCTCAGTCA TGCGATGCGG CGTTTGGAGG CGAGACTTGG CTTCCCTTTG CTATTACGCA CTACGCGTAG CATGACACCG ACGAGCGCGG GATCGGATCT AGCGGCCAGC CTAGAGATCG CGTTCGGGGA GATCGACCGT GAACTGCGGG AATTGGCCGA CCGAAAGGGA CAGGTTGCAG GAACGGTGAG AATCAACGTT CATCGCACCG CAGCCGATCT CTTCGTTCTA CCTAAGCTGT CCACTCTTCA AGAACGTCAT CCGGGCGTGA AGGTTGAACT CGTCATTGAT GATGGCCTGA CCGATATCAT CGCAGCCGGA TGCCATGCAG GGATTCGCAA CGGCAAACTG CTCGCGAACG ACATGGTGGC CGTCCGGATC AGCGGTGAAC ATAGGACTGC CGTCGTAGGC TCCCCTGCGT ATCTGAGTCG ACATCCCACC CCGAACACGC CGGAAGACCT GCGCGATCAT CGCTGCATCG GGTACCGCTT TGTGACGTCC CGCTCTCTTC ATCGATGGCG CTTTCTGCGC GGCGACCAAG ATCTACTTAC AGACTTCGAG CCAGCGCTCA TCGTGGATGA CATCCAGGTC GTGGTGCGCG CCGCCTTGCA GGGTCTCGGC CTAGCCTATA CCCTTCGGGA GGCAGTGGCG GAGCATGTCG AGAACCAAAC CCTCGTTGAA GTACTGAAGG ACTGGTCGAC GCCCGTCGCC GCTGACTATT TGTACTATCC GAGCCGCGGA ACGGTATCAC CCGAGCTGCG GGCGGTTATC GAACACCTGC GCATTTGA
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Protein sequence | MKREDLPDLM AFLIIVQEGS FRKAAAKLHV SPSGLSHAMR RLEARLGFPL LLRTTRSMTP TSAGSDLAAS LEIAFGEIDR ELRELADRKG QVAGTVRINV HRTAADLFVL PKLSTLQERH PGVKVELVID DGLTDIIAAG CHAGIRNGKL LANDMVAVRI SGEHRTAVVG SPAYLSRHPT PNTPEDLRDH RCIGYRFVTS RSLHRWRFLR GDQDLLTDFE PALIVDDIQV VVRAALQGLG LAYTLREAVA EHVENQTLVE VLKDWSTPVA ADYLYYPSRG TVSPELRAVI EHLRI
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