Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_04212 |
Symbol | rsmC |
ID | 8115014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | - |
Start bp | 4523132 |
End bp | 4524163 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644850351 |
Product | hypothetical protein |
Protein accession | YP_003001924 |
Protein GI | 251787620 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.200167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGCAT TTACCCCGGC AAGTGAAGTC TTGCTGCGTC ACAGTGATGA TTTCGAACAA AGCCGTATTC TGTTTGCCGG AGACTTACAG GATGACCTGC CCGCGCGTTT AGATACCGCG GCCAGCCGTG CTCATACCCA GCAATTCCAC CACTGGCAGG TATTAAGCCG CCAGATGGGG GATAACGCCC GTTTCAGTCT GGTCGCCACG GCGGATGACG TCGCAGATTG CGATACGCTG ATTTACTACT GGCCGAAGAA CAAACCGGAA GCCCAGTTCC AGTTGATGAA TTTACTTTCT CTGCTGCCAG TGGGGACAGA TATTTTTGTC GTTGGCGAGA ACCGCAGCGG CGTGCGCAGC GCCGAGCAGA TGCTGGCAGA TTATGCGCCG TTGAATAAAG TCGACAGCGC TCGTCGCTGT GGCCTCTATT TTGGTCGTCT GGAAAAACAG CCGGTATTTG ATGCGGAGAA ATTCTGGGGC GAATACAGCG TCGATGGCCT GACGGTCAAA ACGCTGCCTG GCGTGTTTAG CCGCGACGGT CTGGATGTCG GTAGCCAGTT GCTGCTCTCG ACGTTAACTC CGCACACGAA AGGTAAAGTG CTGGATGTCG GCTGTGGCGC GGGCGTGCTT TCAGTTGCCT TTGCGCGCCA TTCGCCGAAA ATTCGTCTCA CCTTGTGCGA TGTCTCTGCC CCGGCGGTAG AAGCCAGCCG CGCAACACTT GCGGCCAACG GTGTTGAAGG TGAAGTCTTT GCCAGCAACG TCTTTTCCGA GGTGAAAGGT CGTTTTGATA TGATCATCTC CAACCCGCCG TTCCACGATG GGATGCAAAC CAGCCTGGAT GCGGCGCAAA CGCTGATTCG CGGTGCGGTG CGTCATCTTA ATAGCGGCGG CGAGCTGCGA ATTGTAGCGA ACGCCTTCCT GCCTTATCCG GACGTGCTGG ATGAGACATT TGGCTTCCAC GAAGTGATCG CGCAAACAGG GCGCTTCAAG GTGTATCGCG CCATTATGAC CCGCCAGGCG AAGAAAGGTT AA
|
Protein sequence | MSAFTPASEV LLRHSDDFEQ SRILFAGDLQ DDLPARLDTA ASRAHTQQFH HWQVLSRQMG DNARFSLVAT ADDVADCDTL IYYWPKNKPE AQFQLMNLLS LLPVGTDIFV VGENRSGVRS AEQMLADYAP LNKVDSARRC GLYFGRLEKQ PVFDAEKFWG EYSVDGLTVK TLPGVFSRDG LDVGSQLLLS TLTPHTKGKV LDVGCGAGVL SVAFARHSPK IRLTLCDVSA PAVEASRATL AANGVEGEVF ASNVFSEVKG RFDMIISNPP FHDGMQTSLD AAQTLIRGAV RHLNSGGELR IVANAFLPYP DVLDETFGFH EVIAQTGRFK VYRAIMTRQA KKG
|
| |