Gene B21_04048 details

Gene Information

• Locus tag: B21_04048
• Symbol: cpdB
• ID: 8116676
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21
• Kingdom: Bacteria
• Replicon accession: NC_012892
• Strand: -
• Start bp: 4346073
• End bp: 4348016
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 644850198
• Product: hypothetical protein
• Protein accession: YP_003001771
• Protein GI: 251787467
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
• TIGRFAM ID: [TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.897161
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAAGT TTAGCGCAAC GCTCCTGGCC ACGCTGATTG CCGCCAGTGT GAATGCAGCG 
ACGGTCGATC TACGTATCAT GGAAACCACT GATCTGCATA GCAACATGAT GGATTTCGAT 
TATTACAAAG ACACCGCCAC GGAAAAATTC GGACTGGTAC GTACGGCAAG CCTGATTAAC 
GATGCCCGCA ATGAAGTGAA AAACAGCGTA CTGGTCGATA ACGGCGATTT GATTCAGGGG 
AGTCCGCTGG CCGATTACAT ATCGGCGAAA GGATTAAAAG CAGGTGATGT TCATCCGGTT 
TATAAGGCGC TGAATACGCT GGATTATACG GTCGGTACAC TCGGCAATCA TGAATTTAAC 
TACGGTCTGG ATTACCTGAA AAATGCGTTG GCGGGAGCGA AATTCCCTTA TGTAAATGCC 
AACGTCATTG ACGCCAGAAC CAAACAGCCA ATGTTTACAC CGTATTTAAT TAAAGATACC 
GAAGTGGTCG ATAAAGACGG AAAAAAACAG ACGCTGAAGA TTGGCTATAT TGGCGTCGTG 
CCGCCGCAAA TCATGGGCTG GGATAAAGCT AATTTATCCG GAAAAGTGAC GGTGAATGAT 
ATTACCGAAA CCGTGCGCAA ATACGTGCCT GAAATGCGCG AGAAAGGTGC CGATGTCGTT 
GTCGTTCTGG CGCATTCCGG GCTATCTGCC GATCCGTATA AAGTGATGGC GGAAAACTCA 
GTTTATTACC TCAGTGAAAT TCCTGGCGTT AACGCCATTA TGTTTGGCCA TGCTCACGCC 
GTTTTCCCAG GTAAAGATTT TGCTGATATC GAAGGGGCTG ATATCGCGAA AGGCACGCTG 
AATGGTGTTC CGGCGGTAAT GCCGGGCATG TGGGGCGATC ATCTTGGGGT GGTCGACTTA 
CAACTCAGTA ATAACAGCGG TAAATGGCAG GTGACGCAGG CGAAAGCGGA AGCACGGCCG 
ATTTACGACA TCGCCAATAA AAAATCCCTC GCGGCGGAAG ACAGCAAGCT GGTAGAAACA 
CTCAAAGCCG ATCACGATGC CACACGCCAG TTCGTCAGCA AGCCAATCGG TAAATCCGCC 
GACAATATGT ATAGCTATCT GGCGCTGGTG CAGGACGATC CGACCGTGCA GGTGGTGAAC 
AACGCGCAAA AAGCGTATGT CGAGCATTAC ATTCAGGGCG ATCCGGATCT GGCAAAACTG 
CCGGTGCTTT CAGCTGCTGC ACCGTTTAAA GTTGGTGGTC GCAAAAATGA TCCGGCAAGC 
TATGTGGAGG TGGAAAAAGG CCAGTTGACC TTCCGTAATG CCGCCGATCT TTATCTCTAC 
CCCAATACGC TGATTGTGGT GAAAGCCAGC GGTAAAGAGG TGAAAGAGTG GCTGGAGTGC 
TCCGCCGGAC AGTTTAACCA GATTGATCCT GACAACACGA AACCACAGTC ACTCATCAAC 
TGGGATGGTT TCCGCACCTA TAACTTTGAT GTGATTGATG GTGTGAATTA TCAGATTGAT 
GTTACCCAGC CTGCCCGTTA TGACGGCGAG TGCCAGATGG TTAATGCCAA TGCGGAAAGG 
ATTAAGAACC TGACCTTTAA TGGCAAGCCG ATTGATCCGA ACGCCATGTT CCTGGTTGCC 
ACCAATAACT ATCGCGCTTA CGGCGGCAAA TTTGCCGGTA CGGGCGACAG CCATATCGCT 
TTTGCTTCAC CGGATGAGAA CCGCTCGGTG CTGGCAGCGT GGATTGCTGA TGAGTCGAAA 
CGTGCGGGGG AAATTCACCC GGCGGCAGAT AACAACTGGC GTTTAGCACC GATAGCTGGC 
GATAAGAAAC TGGATATCCG TTTCGAAACC TCTCCATCAG ATAAAGCCGC GGCGTTTATT 
AAAGAGAAAG GGCAATATCC GATGAATAAA GTCGCGACCG ATGATATCGG GTTTGCGATT 
TATCAGGTGG ATTTGAGTAA GTAA 

 

Protein sequence

MIKFSATLLA TLIAASVNAA TVDLRIMETT DLHSNMMDFD YYKDTATEKF GLVRTASLIN 
DARNEVKNSV LVDNGDLIQG SPLADYISAK GLKAGDVHPV YKALNTLDYT VGTLGNHEFN 
YGLDYLKNAL AGAKFPYVNA NVIDARTKQP MFTPYLIKDT EVVDKDGKKQ TLKIGYIGVV 
PPQIMGWDKA NLSGKVTVND ITETVRKYVP EMREKGADVV VVLAHSGLSA DPYKVMAENS 
VYYLSEIPGV NAIMFGHAHA VFPGKDFADI EGADIAKGTL NGVPAVMPGM WGDHLGVVDL 
QLSNNSGKWQ VTQAKAEARP IYDIANKKSL AAEDSKLVET LKADHDATRQ FVSKPIGKSA 
DNMYSYLALV QDDPTVQVVN NAQKAYVEHY IQGDPDLAKL PVLSAAAPFK VGGRKNDPAS 
YVEVEKGQLT FRNAADLYLY PNTLIVVKAS GKEVKEWLEC SAGQFNQIDP DNTKPQSLIN 
WDGFRTYNFD VIDGVNYQID VTQPARYDGE CQMVNANAER IKNLTFNGKP IDPNAMFLVA 
TNNYRAYGGK FAGTGDSHIA FASPDENRSV LAAWIADESK RAGEIHPAAD NNWRLAPIAG 
DKKLDIRFET SPSDKAAAFI KEKGQYPMNK VATDDIGFAI YQVDLSK