| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_03996 |
|---|
| Symbol | yjeF |
|---|
| ID | 8115780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | + |
|---|
| Start bp | 4298676 |
|---|
| End bp | 4300223 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644850148 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003001721 |
|---|
| Protein GI | 251787417 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000718963 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACC ATACAATGAA GAAAAACCCC GTAAGTATAC CACACACCGT CTGGTACGCC
GACGATATCC GCCGCGGAGA ACGCGAGGCG GCAGATGCGC TGGGGCTCAC ACTCTATGAG
CTGATGCTTC GCGCTGGCGA AGCAGCATTC CAGGTGTGTC GTTCGGCTTA TCCTGACGCC
CGCCACTGGC TGGTGCTGTG CGGTCATGGT AATAACGGCG GCGATGGCTA TGTGGTCGCG
CGGCTGGCCA CAGCGGTCGG TATTGAGGTC ACGCTGCTGG CCCAGGAAAG TGACAAACCG
TTGCCGGAAG AGGCCGCGCT GGCACGCGAA GCATGGTTAA ACGCGGGTGG CGAGATCCAT
GCTTCGAATA TTGTCTGGCC CGAATCGGTA GATCTGATTG TTGATGCGCT GCTCGGTACC
GGCTTGCAGC AAGCGCCCCG CGAATCCATT AGCCAGTTAA TCGACCACGC TAATTCCCAT
CCTGCGCCGA TTGCGGCGGT TGATATCCCT TCCGGCCTGC TGGCTGAAAC CGGCGCTACG
CCAGGCGCAG TGATCAACGC CGATCACACC ATCACTTTTA TTGCGCTGAA ACCAGGCTTG
CTCACTGGAA AAGCGCGGGA TGTTACAGGA CAACTGCATT TTGACTCACT GGGGCTGGAT
AGCTGGCTGG CAGGTCAGGA GACGAAAATT CAGCGGTTTT CGGCAGAACA ACTTTCTCAC
TGGCTGAAAC CGCGTCGCCC GACTTCGCAT AAAGGCGATC ACGGGCGGCT GGTGATTATC
GGTGGCGATC ACGGCACTGC GGGGGCTATT CGTATGACGG GGGAAGCGGC GCTACGTGCT
GGTGCTGGTT TAGTCCGAGT ACTGACCCGC AGTGAAAACA TTGCGCCGCT GCTGACTGCA
CGACCAGAAT TGATGGTGCA TGAACTGACG ATGGACTCTC TTGCCGAAAG CCTGGAATGG
GCCGATGTGG TGGTGATTGG TCCCGGTCTG GGCCAGCAAG AGTGGGGGAA AAAAGCCCTG
CAAAAAGTTG AGAATTTTCG CAAACCGATG TTGTGGGATG CCGATGCATT GAACCTGCTG
GCAATCAATC CCGATAAGCG TCACAATCGC GTGATCACGC CGCATCCTGG CGAGGCCGCA
CGGTTGTTAG GCTGTTCCGT CGCTGAAATT GAAAGTGACC GCTTACATTG CGCCAAACGT
CTGGTACAAC GTTATGGCGG CGTAGCGGTG CTGAAAGGTG CCGGAACCGT GGTCGCCGCC
CATCCTGACG CTTTAGGCAT TATTGATGTC GGAAATGCAG GCATGGCGAG CGGCGGCATG
GGCGATGTGC TCTCTGGTAT TATTGGCGCA TTGCTTGGGC AAAAACTGTC GCCGTATGAT
GCAGCCTGTG CAGGCTGTGT TGCGCACGGT GCGGCAGCTG ACGTACTGGC GGCGCGTTTT
GGAACGCGCG GGATGCTGGC AACCGATCTC TTTTCCACGC TACAGCGTAT TGTTAACCCG
GAAGTGACTG ATAAAAACCA TGATGAATCG AGTAATCCCG CTCCCTGA
|
|---|
| Protein sequence | MTDHTMKKNP VSIPHTVWYA DDIRRGEREA ADALGLTLYE LMLRAGEAAF QVCRSAYPDA
RHWLVLCGHG NNGGDGYVVA RLATAVGIEV TLLAQESDKP LPEEAALARE AWLNAGGEIH
ASNIVWPESV DLIVDALLGT GLQQAPRESI SQLIDHANSH PAPIAAVDIP SGLLAETGAT
PGAVINADHT ITFIALKPGL LTGKARDVTG QLHFDSLGLD SWLAGQETKI QRFSAEQLSH
WLKPRRPTSH KGDHGRLVII GGDHGTAGAI RMTGEAALRA GAGLVRVLTR SENIAPLLTA
RPELMVHELT MDSLAESLEW ADVVVIGPGL GQQEWGKKAL QKVENFRKPM LWDADALNLL
AINPDKRHNR VITPHPGEAA RLLGCSVAEI ESDRLHCAKR LVQRYGGVAV LKGAGTVVAA
HPDALGIIDV GNAGMASGGM GDVLSGIIGA LLGQKLSPYD AACAGCVAHG AAADVLAARF
GTRGMLATDL FSTLQRIVNP EVTDKNHDES SNPAP
|
|---|
| |