Gene B21_03710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagB21_03710 
SymbolyihO 
ID8114263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21 
KingdomBacteria 
Replicon accessionNC_012892 
Strand
Start bp3969139 
End bp3970542 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content45% 
IMG OID644849871 
Producthypothetical protein 
Protein accessionYP_003001444 
Protein GI251787140 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID[TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGACC ATAATCCACT GACATTAAAA CTGAATCTGT GGGAAAAAAT CGCCTATGGT 
ATGGGCGACG TTGGTTCGAA TTTAATGCTT AGCATCGGTA CTCTGTATCT CCTCAAATTT
TATACCGATG AATTAGGGAT GCCAGCTTAC TATGGCGGGA TTATCTTTCT GGTGGCGAAG
TTTTTTACCG CGTTTACCGA TATGCTCACC GGATTTTTAC TCGACTCGCG GAAAAATATT
GGGCCTAAAG GCAAATTTCG TCCCTTTATT TTATATGCAG CGGTTCCGGC GGCGTTAATT
GCAACGCTCC AGTTTATCGC CACCACTTTT AGTTTGCCGG TTAAAACGAC GATTGCCACG
GCGCTGTTTA TGATGTTTGG GCTTTCATAC AGTCTGATGA ACTGCTCGTA TGGCGCGATG
ATCCCGGCAA TTACCAAAAA CCCGAATGAG CGCGCGCAGC TCGCGGCTTA CCGCCAGGGT
GGTGCAACCA TAGGGCTATT GATTTGTACC GTGGCGTTTA TTCCGTTGCA GTCGCTTTTT
TCTGACTCAA CCGTCGGTTA TGCCTGTGCG GCACTTATGT TCTCCATTGG CGGCTTTATT
TTTATGATGC TGTGCTACAG AGGCGTCAAA GAGCATTATG TGGACACAGC ACCAACCGGA
CATAAAGCCA GTATTCTCAA ATCTTTTTGC GCGATATTTC GGAATCCGCC ATTGCTGGTT
TTATGCATTG CTAACTTGTG TACCCTGGCG GCATTTAATA TCAAACTGGC GATTCAGGTC
TATTACACCC AGTATGTGCT GAATGATATT AATTTATTGT CGTGGATGGG ATTCTTCAGT
ATGGGATGCA TCCTCGTCGG CGTATTACTG GTGCCATTAA CTGTAAAATG TTTTGGTAAA
AAACAGGTTT ATTTAGCTGG CATGGTGCTA TGGGCGGTTG GTGATATCCT GAATTATTTC
TGGGGAAGTA ACTCTTTCAC TTTCGTCATG TTCTCTTGTG TCGCCTTTTT TGGCACGGCC
TTTGTAAACA GCCTGAACTG GGCGCTGGTA CCAGATACCG TAGATTACGG TGAATGGAAA
ACCGGTATTC GTGCCGAAGG TTCTGTTTAT ACCGGTTATA CCTTCTTTCG TAAAATTTCT
GCCGCACTTG CTGGCTTCTT GCCAGGCATT ATGCTGACGC AAATCGGTTA TGTTCCCAAC
ATCGCGCAAA GTGATGCGAC ATTACAGGGT TTGCGTCAGC TCATTTTTAT CTGGCCTTGT
GCACTGGCAA TTATTGCTGC ATTGACGATG GGATTCTTTT ACACACTCAA TGAAAAACGG
TTTGCGTTGA TTATTGAGGA AATCAACCAA CGCAAAAATA AAGAAATTGA GACAGAAGAA
AAAACGGCTT CCGTAACGTT ATAA
 
Protein sequence
MSDHNPLTLK LNLWEKIAYG MGDVGSNLML SIGTLYLLKF YTDELGMPAY YGGIIFLVAK 
FFTAFTDMLT GFLLDSRKNI GPKGKFRPFI LYAAVPAALI ATLQFIATTF SLPVKTTIAT
ALFMMFGLSY SLMNCSYGAM IPAITKNPNE RAQLAAYRQG GATIGLLICT VAFIPLQSLF
SDSTVGYACA ALMFSIGGFI FMMLCYRGVK EHYVDTAPTG HKASILKSFC AIFRNPPLLV
LCIANLCTLA AFNIKLAIQV YYTQYVLNDI NLLSWMGFFS MGCILVGVLL VPLTVKCFGK
KQVYLAGMVL WAVGDILNYF WGSNSFTFVM FSCVAFFGTA FVNSLNWALV PDTVDYGEWK
TGIRAEGSVY TGYTFFRKIS AALAGFLPGI MLTQIGYVPN IAQSDATLQG LRQLIFIWPC
ALAIIAALTM GFFYTLNEKR FALIIEEINQ RKNKEIETEE KTASVTL