| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_03629 |
|---|
| Symbol | hemC |
|---|
| ID | 8116312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | - |
|---|
| Start bp | 3878172 |
|---|
| End bp | 3879113 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644849793 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003001366 |
|---|
| Protein GI | 251787062 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0181] Porphobilinogen deaminase |
|---|
| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.193331 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGACA ATGTTTTAAG AATTGCCACA CGCCAAAGCC CACTTGCACT CTGGCAGGCA
CACTATGTCA AAGACAAGTT GATGGCGAGC CATCCGGGCC TGGTCGTTGA ACTGGTACCG
ATGGTGACGC GCGGCGATGT GATTCTTGAT ACGCCGCTGG CGAAAGTAGG CGGAAAAGGC
TTATTTGTTA AAGAGCTGGA AGTCGCGCTC CTCGAAAATC GCGCCGATAT CGCCGTACAT
TCAATGAAAG ATGTGCCGGT TGAATTCCCG CAAGGTCTGG GACTGGTCAC TATTTGTGAG
CGTGAAGATC CTCGCGATGC CTTTGTGTCC AATAACTATG ACAATCTGGA TGCGTTACCG
GCAGGCAGTA TCGTCGGGAC GTCCAGTTTA CGTCGCCAGT GCCAACTGGC TGAACGCCGC
CCGGATCTGA TTATCCGCTC CCTGCGAGGC AACGTCGGCA CTCGCCTGAG TAAACTGGAT
AACGGCGAAT ACGATGCCAT CATTCTTGCG GTAGCCGGAC TAAAACGTTT AGGTCTGGAG
TCCCGCATTC GCGCCGCATT GCCACCCGAG ATTTCTCTTC CGGCGGTAGG ACAAGGTGCG
GTGGGTATTG AATGCCGCCT TGATGATTCT CGCACTCGCG AGCTGCTTGC CGCGCTGAAT
CACCACGAAA CTGCACTGCG CGTTACCGCA GAACGCGCCA TGAATACCCG TCTCGAAGGC
GGATGTCAGG TGCCAATTGG TAGCTACGCC GAGCTTATTG ATGGCGAAAT CTGGCTGCGT
GCGTTGGTCG GCGCGCCGGA CGGTTCGCAG ATTATTCGCG GTGAACGCCG CGGTGCGCCG
CAAGATGCCG AACAAATGGG GATTTCGCTG GCAGAAGAGC TACTGAATAA CGGCGCGCGC
GAGATCCTCG CTGAAGTCTA TAACGGAGAC GCTCCGGCAT GA
|
|---|
| Protein sequence | MLDNVLRIAT RQSPLALWQA HYVKDKLMAS HPGLVVELVP MVTRGDVILD TPLAKVGGKG
LFVKELEVAL LENRADIAVH SMKDVPVEFP QGLGLVTICE REDPRDAFVS NNYDNLDALP
AGSIVGTSSL RRQCQLAERR PDLIIRSLRG NVGTRLSKLD NGEYDAIILA VAGLKRLGLE
SRIRAALPPE ISLPAVGQGA VGIECRLDDS RTRELLAALN HHETALRVTA ERAMNTRLEG
GCQVPIGSYA ELIDGEIWLR ALVGAPDGSQ IIRGERRGAP QDAEQMGISL AEELLNNGAR
EILAEVYNGD APA
|
|---|
| |