Gene B21_03623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagB21_03623 
SymbolyifK 
ID8114343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21 
KingdomBacteria 
Replicon accessionNC_012892 
Strand
Start bp3869204 
End bp3870589 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content53% 
IMG OID644849787 
Producthypothetical protein 
Protein accessionYP_003001360 
Protein GI251787056 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000382279 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGATA ACAAACCAGA GCTACAGCGT GGGCTGGAAG CTCGACATAT CGAACTCATC 
GCCCTGGGGG GCACCATTGG CGTCGGCCTG TTTATGGGGG CCGCCAGTAC CCTGAAGTGG
GCCGGGCCAT CCGTATTGTT GGCCTATATC ATCGCCGGGC TATTCGTCTT TTTCATCATG
CGTTCAATGG GCGAAATGTT GTTCCTCGAA CCGGTTACCG GTTCGTTCGC CGTTTATGCG
CATCGTTATA TGAGCCCGTT TTTTGGCTAT CTCACCGCCT GGTCTTACTG GTTTATGTGG
ATGGCTGTGG GGATCTCAGA AATCACCGCC ATTGGCGTTT ATGTCCAGTT CTGGTTCCCG
GAGATGGCGC AGTGGATACC CGCATTGATC GCGGTGGCGC TGGTGGCGTT GGCGAATCTG
GCGGCGGTGC GGTTGTACGG CGAAATCGAG TTCTGGTTCG CAATGATCAA AGTCACCACG
ATTATCGTGA TGATTGTTAT TGGCCTGGGC GTGATTTTCT TTGGCTTTGG CAATGGCGGG
CAGTCGATTG GTTTTAGCAA TCTCACAGAG CATGGCGGTT TCTTTGCGGG TGGCTGGAAA
GGGTTCCTGA CCGCGCTGTG TATTGTGGTA GCGTCCTACC AGGGCGTGGA ACTGATTGGC
ATTACTGCCG GTGAAGCGAA GAATCCGCAG GTGACGCTGC GCAGTGCCGT AGGCAAGGTG
CTGTGGCGAA TCCTGATTTT CTACGTAGGC GCGATTTTCG TTATCGTCAC CATCTTCCCG
TGGAATGAAA TAGGCAGCAA CGGTAGCCCG TTCGTACTGA CTTTCGCCAA AATCGGCATT
ACCGCAGCGG CGGGCATTAT CAACTTTGTG GTGCTGACGG CTGCGCTCTC TGGCTGTAAC
AGCGGCATGT ACAGTTGCGG ACGTATGCTC TATGCACTGG CGAAAAACCG TCAGTTACCG
GCGGCAATGG CGAAAGTTTC CCGTCACGGC GTACCGGTTG CGGGTGTGGC AGTATCTATT
GCTATTCTGC TAATTGGCTC ATGCCTGAAC TACATCATTC CCAATCCGCA GCGTGTGTTT
GTCTACGTCT ACAGTGCCAG CGTGCTTCCG GGGATGGTGC CATGGTTTGT GATATTGATT
AGCCAGCTGC GTTTTCGTCG TGCGCATAAA GCGGCAATTG CCAGCCATCC GTTCCGCTCA
ATCCTGTTCC CGTGGGCCAA CTACGTAACA ATGGCATTCC TGATTTGCGT TTTGATCGGC
ATGTACTTTA ATGAAGATAC GCGTATGTCG CTGTTTGTCG GCATCATCTT TATGCTGGCG
GTGACGGCGA TTTATAAAAT TTTTGGGCTT AATCGACACG GTAAAGCGCA TAAACTGGAG
GAATAA
 
Protein sequence
MADNKPELQR GLEARHIELI ALGGTIGVGL FMGAASTLKW AGPSVLLAYI IAGLFVFFIM 
RSMGEMLFLE PVTGSFAVYA HRYMSPFFGY LTAWSYWFMW MAVGISEITA IGVYVQFWFP
EMAQWIPALI AVALVALANL AAVRLYGEIE FWFAMIKVTT IIVMIVIGLG VIFFGFGNGG
QSIGFSNLTE HGGFFAGGWK GFLTALCIVV ASYQGVELIG ITAGEAKNPQ VTLRSAVGKV
LWRILIFYVG AIFVIVTIFP WNEIGSNGSP FVLTFAKIGI TAAAGIINFV VLTAALSGCN
SGMYSCGRML YALAKNRQLP AAMAKVSRHG VPVAGVAVSI AILLIGSCLN YIIPNPQRVF
VYVYSASVLP GMVPWFVILI SQLRFRRAHK AAIASHPFRS ILFPWANYVT MAFLICVLIG
MYFNEDTRMS LFVGIIFMLA VTAIYKIFGL NRHGKAHKLE E