| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_03614 |
|---|
| Symbol | rffD |
|---|
| ID | 8113840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | + |
|---|
| Start bp | 3859577 |
|---|
| End bp | 3860839 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644849778 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003001351 |
|---|
| Protein GI | 251787047 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTG CGACCATTTC TGTTATCGGA CTGGGTTATA TCGGGCTGCC AACGGCAGCA
GCGTTTGCCT CACGGCAAAA ACAGGTAATT GGTGTCGATA TCAACCAACA TGCGGTTGAT
ACCATCAATC GTGGCGAAAT CCATATCGTC GAACCTGATT TGGCGAGTGT AGTAAAAACT
GCCGTAGAAG GCGGTTTTTT ACGAGCGAGC ACGACGCCAG TTGAAGCGGA TGCCTGGCTG
ATTGCTGTAC CCACGCCGTT TAAGGGCGAT CATGAGCCAG ATATGACCTA CGTTGAATCG
GCTGCTCGCT CCATTGCGCC AGTGCTGAAA AAAGGCGCGC TGGTGATCCT TGAATCCACC
TCGCCGGTGG GGTCAACCGA GAAGATGGCA GAATGGTTAG CAGAGATGCG TCCAGATCTC
ACTTTCCCGC AGCAGGTGGG CGAGCAGGCG GACGTCAACA TTGCTTACTG CCCGGAACGC
GTGTTACCAG GACAGGTAAT GGTCGAGCTG ATTAAAAACG ATCGCGTGAT TGGTGGTATG
ACGCCGGTTT GTTCGGCCCG CGCCAGCGAA CTGTACAAAA TTTTCCTCGA AGGTGAGTGT
GTCGTCACTA ACTCGCGGAC GGCGGAAATG TGTAAGCTCA CCGAAAACAG CTTCCGCGAT
GTGAATATCG CTTTTGCTAA TGAATTGTCG CTGATTTGTG CCGATCAGGG GATTAACGTC
TGGGAACTGA TTCGCCTGGC GAATCGTCAC CCTCGCGTTA ATATTCTTCA GCCTGGCCCT
GGCGTGGGCG GTCACTGCAT TGCTGTTGAT CCGTGGTTTA TCGTGGCACA GAACCCCCAG
CAGGCGCGGC TTATCCGTAC CGCGCGCGAA GTGAACGATC ACAAACCGTT CTGGGTTATC
GATCAGGTGA AAGCGGCGGT GGCTGATTGC CTGGCGGCTA CCGATAAACG CGCCAGTGAA
CTGAAAATCG CCTGCTTTGG TCTGGCGTTT AAACCGAATA TTGATGACCT GCGCGAAAGC
CCGGCGATGG AAATCGCTGA ACTGATCGCC CAGTGGCATA GCGGCGAAAC TCTGGTTGTT
GAGCCTAACA TCCACCAGTT GCCGAAAAAA CTGACCGGGC TTTGTACTCT GGCGCAGCTT
GACGAGGCGC TGGCAACGGC AGACGTGCTG GTGATGCTGG TCGATCATAG TCAGTTCAAA
GTTATCAATG GCGACAATGT CCATCAGCAG TATGTCGTCG ATGCCAAAGG AGTCTGGCGC
TGA
|
|---|
| Protein sequence | MSFATISVIG LGYIGLPTAA AFASRQKQVI GVDINQHAVD TINRGEIHIV EPDLASVVKT
AVEGGFLRAS TTPVEADAWL IAVPTPFKGD HEPDMTYVES AARSIAPVLK KGALVILEST
SPVGSTEKMA EWLAEMRPDL TFPQQVGEQA DVNIAYCPER VLPGQVMVEL IKNDRVIGGM
TPVCSARASE LYKIFLEGEC VVTNSRTAEM CKLTENSFRD VNIAFANELS LICADQGINV
WELIRLANRH PRVNILQPGP GVGGHCIAVD PWFIVAQNPQ QARLIRTARE VNDHKPFWVI
DQVKAAVADC LAATDKRASE LKIACFGLAF KPNIDDLRES PAMEIAELIA QWHSGETLVV
EPNIHQLPKK LTGLCTLAQL DEALATADVL VMLVDHSQFK VINGDNVHQQ YVVDAKGVWR
|
|---|
| |