| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_03563 |
|---|
| Symbol | atpH |
|---|
| ID | 8113582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | - |
|---|
| Start bp | 3806748 |
|---|
| End bp | 3807281 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644849731 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003001304 |
|---|
| Protein GI | 251787000 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
|---|
| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00259121 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAT TTATTACGGT AGCTCGCCCC TACGCCAAAG CAGCTTTTGA CTTTGCCGTC
GAACACCAAA GTGTAGAACG CTGGCAGGAC ATGCTGGCGT TTGCCGCCGA GGTAACCAAA
AACGAACAAA TGGCAGAGCT TCTCTCTGGC GCGCTTGCGC CAGAAACGCT CGCCGAGTCG
TTTATCGCAG TTTGTGGTGA GCAACTGGAC GAAAACGGTC AGAACCTGAT TCGGGTTATG
GCTGAAAATG GTCGTCTTAA CGCGCTCCCG GATGTTCTGG AGCAGTTTAT TCACCTGCGT
GCCGTGAGTG AGGCTACCGC TGAGGTAGAC GTCATTTCCG CTGCCGCACT GAGTGAACAA
CAGCTCGCGA AAATTTCTGC TGCGATGGAA AAACGTCTGT CACGCAAAGT TAAGCTGAAT
TGCAAAATCG ATAAGTCTGT AATGGCAGGC GTTATCATCC GAGCGGGTGA TATGGTCATT
GATGGCAGCG TACGCGGTCG TCTTGAGCGC CTTGCAGACG TCTTGCAGTC TTAA
|
|---|
| Protein sequence | MSEFITVARP YAKAAFDFAV EHQSVERWQD MLAFAAEVTK NEQMAELLSG ALAPETLAES
FIAVCGEQLD ENGQNLIRVM AENGRLNALP DVLEQFIHLR AVSEATAEVD VISAAALSEQ
QLAKISAAME KRLSRKVKLN CKIDKSVMAG VIIRAGDMVI DGSVRGRLER LADVLQS
|
|---|
| |