Gene B21_03459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagB21_03459 
SymbolspoT 
ID8115248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21 
KingdomBacteria 
Replicon accessionNC_012892 
Strand
Start bp3687268 
End bp3689376 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content54% 
IMG OID644849632 
Producthypothetical protein 
Protein accessionYP_003001205 
Protein GI251786901 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTATCTGT TTGAAAGCCT GAATCAACTG ATTCAAACCT ACCTGCCGGA AGACCAAATC 
AAGCGTCTGC GGCAGGCGTA TCTCGTTGCA CGTGATGCTC ACGAGGGGCA AACACGTTCA
AGCGGTGAAC CCTATATCAC GCACCCGGTA GCGGTTGCCT GCATTCTGGC CGAGATGAAA
CTCGACTATG AAACGCTGAT GGCGGCGCTG CTGCATGACG TGATTGAAGA TACTCCCGCC
ACCTACCAGG ATATGGAACA GCTTTTTGGT AAAAGCGTCG CCGAGCTGGT AGAGGGGGTG
TCGAAACTTG ATAAACTCAA GTTCCGCGAT AAGAAAGAGG CGCAGGCCGA AAACTTTCGC
AAGATGATTA TGGCGATGGT GCAGGATATC CGCGTCATCC TCATCAAACT TGCCGACCGT
ACCCACAACA TGCGCACGCT GGGCTCACTT CGCCCGGACA AACGTCGCCG CATCGCCCGT
GAAACTCTCG AAATTTACAG CCCGCTGGCG CACCGTTTAG GTATCCACCA CATTAAAACC
GAACTCGAAG AGCTGGGTTT TGAGGCGCTG TATCCCAATC GTTACCGCGT AATTAAAGAA
GTGGTGAAAG CCGCGCGCGG CAACCGTAAA GAGATGATCC AAAAAATCCT CTCTGAAATC
GAAGGGCGTT TGCAGGAAGC GGGAATACCG TGCCGCGTCA GTGGTCGCGA AAAGCATCTT
TATTCGATTT ACTGCAAAAT GGTGCTCAAA GAGCAGCGTT TTCACTCAAT CATGGACATC
TACGCTTTCC GCGTGATCGT CAATGATTCT GACACCTGTT ATCGCGTGCT GGGCCAGATG
CACAGCCTGT ACAAGCCGCG TCCGGGCCGC GTGAAAGACT ATATCGCCAT TCCAAAAGCG
AACGGCTATC AGTCGTTGCA CACCTCGATG ATTGGCCCGC ACAGCGTGCC GGTTGAGGTC
CAGATCCGTA CCGAAGATAT GGATCAGATG GCGGAGATGG GTGTTGCCGC GCACTGGGCT
TATAAAGAGC ACGGCGAAAC CAGTACTACC GCACAAATCC GCGCCCAGCG CTGGATGCAA
AGCCTGCTGG AGCTGCAACA GAGCGCCGGT AGTTCGTTTG AATTTATCGA GAGCGTTAAA
TCCGATCTCT TCCCGGATGA GATTTACGTT TTCACACCGG AAGGGCGCAT TGTCGAGCTG
CCTGCCGGTG CAACGCCCGT CGACTTCGCT TATGCAGTGC ATACCGATAT CGGTCATGCC
TGCGTGGGCG CACGCGTTGA CCGCCAGCCT TACCCGCTGT CGCAGCCGCT TACCAGCGGT
CAAACCGTTG AAATCATTAC CGCTCCGGGC GCTCGCCCGA ATGCCGCTTG GCTGAACTTT
GTCGTTAGCT CGAAAGCGCG CGCCAAAATT CGTCAGTTGC TGAAAAACCT CAAGCGTGAT
GATTCTGTAA GCCTGGGCCG TCGTCTGCTC AACCATGCTT TGGGTGGTAG CCGTAAGCTG
AATGAAATCC CGCAGGAAAA TATTCAGCGC GAGCTGGATC GCATGAAGCT GGCAACGCTT
GACGATCTGC TGGCAGAAAT CGGACTTGGT AACGCAATGA GCGTGGTGGT CGCGAAAAAT
CTGCAACATG GGGACGCCTC CATTCCACCG GCAACCCAAA GCCACGGACA TCTGCCCATT
AAAGGTGCCG ATGGCGTGCT GATCACCTTT GCGAAATGCT GCCGCCCTAT TCCTGGCGAC
CCGATTATCG CCCACGTCAG CCCCGGTAAA GGTCTGGTGA TCCACCATGA ATCCTGCCGT
AATATCCGTG GCTACCAGAA AGAGCCAGAG AAGTTTATGG CTGTGGAATG GGATAAAGAG
ACGGCGCAGG AGTTCATCAC CGAAATCAAG GTGGAGATGT TCAATCATCA GGGTGCGCTG
GCAAACCTGA CGGCGGCAAT TAACACCACG ACTTCGAATA TTCAAAGTTT GAATACGGAA
GAGAAAGATG GTCGCGTCTA CAGCGCCTTT ATTCGTCTGA CCGCTCGTGA CCGTGTGCAT
CTGGCGAATA TCATGCGCAA AATCCGCGTG ATGCCAGACG TGATTAAAGT CACCCGAAAC
CGAAATTAA
 
Protein sequence
MYLFESLNQL IQTYLPEDQI KRLRQAYLVA RDAHEGQTRS SGEPYITHPV AVACILAEMK 
LDYETLMAAL LHDVIEDTPA TYQDMEQLFG KSVAELVEGV SKLDKLKFRD KKEAQAENFR
KMIMAMVQDI RVILIKLADR THNMRTLGSL RPDKRRRIAR ETLEIYSPLA HRLGIHHIKT
ELEELGFEAL YPNRYRVIKE VVKAARGNRK EMIQKILSEI EGRLQEAGIP CRVSGREKHL
YSIYCKMVLK EQRFHSIMDI YAFRVIVNDS DTCYRVLGQM HSLYKPRPGR VKDYIAIPKA
NGYQSLHTSM IGPHSVPVEV QIRTEDMDQM AEMGVAAHWA YKEHGETSTT AQIRAQRWMQ
SLLELQQSAG SSFEFIESVK SDLFPDEIYV FTPEGRIVEL PAGATPVDFA YAVHTDIGHA
CVGARVDRQP YPLSQPLTSG QTVEIITAPG ARPNAAWLNF VVSSKARAKI RQLLKNLKRD
DSVSLGRRLL NHALGGSRKL NEIPQENIQR ELDRMKLATL DDLLAEIGLG NAMSVVVAKN
LQHGDASIPP ATQSHGHLPI KGADGVLITF AKCCRPIPGD PIIAHVSPGK GLVIHHESCR
NIRGYQKEPE KFMAVEWDKE TAQEFITEIK VEMFNHQGAL ANLTAAINTT TSNIQSLNTE
EKDGRVYSAF IRLTARDRVH LANIMRKIRV MPDVIKVTRN RN