Gene B21_03392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagB21_03392 
SymbolyiaV 
ID8112593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21 
KingdomBacteria 
Replicon accessionNC_012892 
Strand
Start bp3617428 
End bp3618564 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content51% 
IMG OID644849565 
Producthypothetical protein 
Protein accessionYP_003001138 
Protein GI251786834 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAC TGATTATTTT GACCTATGTG GCTTTTGCAT GGGCAATGTT TAAGATCTTC 
AAAATTCCCG TAAATAAATG GACCATTCCC ACAGCGACCC TGGGTGGAAT ATTTATTGTC
AGCGGTCTAA TTCTGTTAAT GAACTATAAC CATCCGTATA CCTTTAAAGC GCAAAAAGCG
GTTATTTCTA TTCCTGTTGT CCCACAGGTG ACTGGTGTGG TGATTGAAGT GACGGATAAG
AAAAATACGC TGATTAAAAA AGGTGAGGTG CTATTTCGAC TGGACCCGAC GCGTTATCAG
GCGCGGGTGG ATCGGCTGAT GGCGGATATC GTTACCGCAG AACATAAACA GCGGGCGTTG
GGCGCAGAGT TAGATGAGAT GGCGGCGAAT ACTCAGCAGG CAAAGGCCAC GCGGGATAAA
TTCGCTAAAG AGTATCAGCG TTACGCACGT GGCAGCCAGG CGAAAGTAAA CCCGTTTTCA
GAACGCGATA TCGATGTGGC GCGGCAAAAT TATCTGGCGC AGGAAGCCTC CGTGAAGTCA
TCGGCGGCGG AACAAAAACA GATCCAGAGC CAGCTGGATA GCCTGGTGTT GGGTGAACAT
TCTCAAATCG CCAGCCTGAA AGCACAGCTC GCGGAAGCAA AATATAACCT TGAGCAGACG
ATAGTGCGTG CGCCGAGCGA TGGTTATGTG ACCCAGGTAC TGATTCGTCC GGGTACCTAT
GCCGCGTCGC TGCCGCTACG TCCGGTGATG GTGTTTATAC CCGATCAGAA ACGACAAATC
GTGGCGCAGT TCCGTCAGAA CTCCTTGCTG CGACTGGCTC CTGGCGACGA TGCGGAAGTG
GTGTTTAATG CTCTGCCAGG TAAGGTATTC AGCGGTAAGC TGGCAGCCAT TAGTCCAGCC
GTTCCCGGCG GAGCTTATCA GTCGACCGGC ACCTTACAGA CGTTAAACAC AGCGCCGGGT
TCAGATGGCG TTATCGCGAC CATTGAACTG GATGAGCACA CTGATTTGAG CGCTTTACCA
GACGGTATTT ACGCCCAGGT GGCGGTTTAC TCTGATCATT TCAGCCATGT CTCGGTGATG
CGCAAAGTGC TATTACGCAT GACCAGCTGG GTGCATTACC TTTATCTCGA TCATTAA
 
Protein sequence
MDLLIILTYV AFAWAMFKIF KIPVNKWTIP TATLGGIFIV SGLILLMNYN HPYTFKAQKA 
VISIPVVPQV TGVVIEVTDK KNTLIKKGEV LFRLDPTRYQ ARVDRLMADI VTAEHKQRAL
GAELDEMAAN TQQAKATRDK FAKEYQRYAR GSQAKVNPFS ERDIDVARQN YLAQEASVKS
SAAEQKQIQS QLDSLVLGEH SQIASLKAQL AEAKYNLEQT IVRAPSDGYV TQVLIRPGTY
AASLPLRPVM VFIPDQKRQI VAQFRQNSLL RLAPGDDAEV VFNALPGKVF SGKLAAISPA
VPGGAYQSTG TLQTLNTAPG SDGVIATIEL DEHTDLSALP DGIYAQVAVY SDHFSHVSVM
RKVLLRMTSW VHYLYLDH