Gene B21_03330 details

Gene Information

• Locus tag: B21_03330
• Symbol: yhjK
• ID: 8113425
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21
• Kingdom: Bacteria
• Replicon accession: NC_012892
• Strand: -
• Start bp: 3544029
• End bp: 3545978
• Gene Length: 1950 bp
• Protein Length: 649 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 644849505
• Product: hypothetical protein
• Protein accession: YP_003001078
• Protein GI: 251786774
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2200] FOG: EAL domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGGCAG CCGTTGTCCT GGTGTTCGTT TTTATTTTTT GCACCGTTTT GCTGTTCCAT 
CTGGTCCAGC AGAATCGCTA TAACACGGCT ACGCAACTGG AAAGCATTGC TCGCTCTGTC 
CGCGAACCCT TATCTTCAGC TATTTTGAAA GGCGATATTC CCGAAGCGGA AGCTATTCTT 
GCCAGCATTA AACCGGCAGG CGTGGTCAGC CGTGCCGATG TAGTGCTGCC TAACCAGTTC 
CAGGCGCTGC GTAAAAGTTT TATTCCAGAG CGCCCGGTGC CGGTAATGGT TACTCGCCTG 
TTTGAGCTAC CGGTTCAAAT CTCGCTGGGC GTTTACTCGC TCGAACGTCC GGCAAACCCG 
CAGCCAATTG CCTATCTGGT ACTACAGGCG GATTCCTTCC GTATGTATAA GTTCGTGATG 
AGCACCCTCT CAACGTTAGT GACCATTTAC TTACTTTTGT CGCTTATCCT GACCGTCGCC 
ATCAGCTGGT GCATTAACCG CCTGATTTTG CATCCGTTAC GCAATATTGC TCGCGAACTT 
AACGCCATCC CAGCCAAGGA GCTTGTTGGT CACCAACTGG CATTACCGCG TCTGCATCAG 
GACGATGAAA TCGGTATGTT GGTGCGCAGT TACAACCTCA ACCAGCAATT GCTGCAGCGC 
CATTATGAAG AACAGAACGA AAATGCGATG CGCTTCCCGG TGTCGGATTT GCCGAACAAA 
GCCTTGCTGA TGGAGATGCT GGAGCAGGTT GTCGCGCGTA AACAAACCAC CGCGCTGATG 
ATCATCACCT GTGAAACCCT GCGTGATACT GCGGGCGTGC TGAAAGAGGC GCAACGAGAA 
ATTCTGCTGC TGACGCTGGT GGAAAAACTC AAATCGGTAC TGTCGCCACG TATGATCCTC 
GCGCAGATTA GCGGTTATGA CTTTGCTGTC ATTGCCAACG GTGTACAGGA ACCGTGGCAC 
GCAATCACCT TAGGTCAGCA AGTGCTCACT ATCATGAGCG AGCGCCTGCC GATTGAACGT 
ATTCAACTCC GTCCGCACTG TAGCATTGGC GTGGCGATGT TCTACGGCGA TCTCACCGCC 
GAACAGCTTT ACAGTCGCGC TATTTCTGCG GCATTTACCG CTCGCCATAA AGGCAAGAAT 
CAGATTCAGT TCTTTGATCC GCAGCAGATG GAAGCCGCCC AGAAGCGGTT GACGGAAGAG 
AGCGATATCC TTAATGCACT GGAAAATCAT CAGTTTGCTA TTTGGTTACA GCCACAGGTC 
GAGATGACCA GCGGTAAACT GGTCAGTGCG GAAGTGTTAC TGCGTATCCA GCAACCGGAT 
GGCAGTTGGG ACCTGCCGGA TGGCTTAATC GATCGCATTG AGTGCTGTGG GCTGATGGTT 
ACCGTCGGTC ACTGGGTGCT GGAAGAGTCC TGTCGATTGC TTGCAGCCTG GCAAGAGCGC 
GGCATTATGC TGCCCTTGTC GGTAAACCTC TCTGCGCTGC AACTGATGCA CCCGAATATG 
GTGGCGGATA TGCTGGAACT GTTAACCCGC TATCGCATTC AGCCGGGAAC ACTGATTCTG 
GAAGTGACAG AAAGCCGACG TATTGACGAC CCTCATGCTG CGGTGGCAAT CCTCCGTCCG 
CTGCGCAATG CCGGAGTTCG GGTGGCGCTG GATGATTTCG GCATGGGCTA CGCAGGGCTG 
CGTCAGCTGC AGCATATGAA ATCGTTGCCA ATCGACGTAC TGAAAATCGA CAAAATGTTT 
GTTGAAGGCT TGCCGGGAGA TAGCAGCATG ATTGCTGCAA TTATCATGCT GGCGCAGAGC 
CTGAACTTAC AAATGATTGC CGAAGGCGTG GAGACTGAAG CACAACGCGA CTGGCTGGCA 
AAAGCGGGCG TTGGTATTGC CCAGGGCTTC CTTTTTGCTC GCCCACTCCC TATTGAAATC 
TTCGAAGAGA GTTACCTGGA AGAAAAGTAG 

 

Protein sequence

MVAAVVLVFV FIFCTVLLFH LVQQNRYNTA TQLESIARSV REPLSSAILK GDIPEAEAIL 
ASIKPAGVVS RADVVLPNQF QALRKSFIPE RPVPVMVTRL FELPVQISLG VYSLERPANP 
QPIAYLVLQA DSFRMYKFVM STLSTLVTIY LLLSLILTVA ISWCINRLIL HPLRNIAREL 
NAIPAKELVG HQLALPRLHQ DDEIGMLVRS YNLNQQLLQR HYEEQNENAM RFPVSDLPNK 
ALLMEMLEQV VARKQTTALM IITCETLRDT AGVLKEAQRE ILLLTLVEKL KSVLSPRMIL 
AQISGYDFAV IANGVQEPWH AITLGQQVLT IMSERLPIER IQLRPHCSIG VAMFYGDLTA 
EQLYSRAISA AFTARHKGKN QIQFFDPQQM EAAQKRLTEE SDILNALENH QFAIWLQPQV 
EMTSGKLVSA EVLLRIQQPD GSWDLPDGLI DRIECCGLMV TVGHWVLEES CRLLAAWQER 
GIMLPLSVNL SALQLMHPNM VADMLELLTR YRIQPGTLIL EVTESRRIDD PHAAVAILRP 
LRNAGVRVAL DDFGMGYAGL RQLQHMKSLP IDVLKIDKMF VEGLPGDSSM IAAIIMLAQS 
LNLQMIAEGV ETEAQRDWLA KAGVGIAQGF LFARPLPIEI FEESYLEEK