| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_03320 |
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| Symbol | treF |
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| ID | 8112564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012892 |
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| Strand | + |
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| Start bp | 3529992 |
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| End bp | 3531641 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644849496 |
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| Product | hypothetical protein |
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| Protein accession | YP_003001069 |
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| Protein GI | 251786765 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1626] Neutral trehalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000901964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAATC AGAAAATTCA AAACCCTAAT CCAGACGAAC TGATGATCGA AGTCGATCTC
TGCTATGAGC TGGACCCGTA TGAATTAAAA CTGGATGAGA TGATCGAGGC AGAACCGGAA
CCCGAGATGA TTGAAGGGCT GCCCGCCTCT GATGCGCTGA CGCCTGCCGA TCGCTATCTC
GAACTGTTCG AGCATGTTCA GTCGGCGAAA ATTTTCCCCG ACAGTAAAAC CTTTCCCGAC
TGCGCACCCA AAATGGACCC GCTGGATATT TTAATCCGCT ACCGTAAAGT GCGCCGTCAT
CGTGATTTTG ACTTGCGCAA GTTTGTTGAA AATCACTTCT GGCTGCCGGA GGTCTACTCC
AGCGAGTATG TATCGGACCC GCAAAATTCC CTGAAAGAGC ATATCGACCA GCTGTGGCCG
GTGCTAACCC GCGAACCACA GGATCACATT CCGTGGTCTT CTCTACTGGC GCTGCCGCAG
TCATATATTG TCCCGGGCGG CCGTTTTAGC GAAACCTACT ATTGGGACTC CTATTTCACC
ATGCTGGGGC TGGCGGAAAG TGGTCGGGAA GATTTACTGA AATGCATGGC CGATAACTTC
GCCTGGATGA TCGAAAACTA TGGTCACATC CCCAACGGCA ACCGCACCTA TTATTTGAGC
CGATCGCAAC CACCGGTTTT TGCGCTGATG GTGGAGTTGT TTGAAGAAGA TGGTGTACGC
GGTGCGCGCC GCTATCTCGA CCACCTTAAA ATGGAATATG CCTTCTGGAT GGACGGTGCA
GAATCGTTGA TCCCTAATCA GGCCTATCGC CATGTTGTGC GGATGCCGGA CGGATCGCTG
CTCAACCGTT ATTGGGACGA TCGCGACACG CCGCGTGACG AATCCTGGCT TGAGGACGTT
GAAACCGCGA AACATTCTGG TCGCCCGCCC AACGAGGTGT ACCGCGATTT ACGCGCGGGA
GCGGCCTCAG GTTGGGATTA CTCTTCCCGT TGGCTGCGTG ATACTGGTCG TCTGGCGAGC
ATTCGTACCA CCCAGTTCAT CCCCATCGAT CTGAATGCCT TCCTGTTTAA ACTGGAGAGC
GCCATCGCCA ACATCTCGGC GCTGAAAGGC GAGAAAGAGA CAGAAGCGCT GTTCCGCCAG
AAGGCCAGTG CCCGTCGCGA TGCGGTAAAC CGTTACCTCT GGGATGATGA AAACGGCATC
TACCGCGATT ACGACTGGCG ACGCGAACAA CTGGCGCTGT TTTCCGCTGC CGCCATTGTG
CCGCTCTATG TCGGCATGGC GAACCATGAA CAGGCCGATC GTCTGGCAAA CGCCGTACGC
AGCCGGTTAC TGACACCTGG CGGGATTCTG GCAAGCGAGT ACGAAACCGG TGAACAGTGG
GATAAACCCA ATGGCTGGGC ACCGTTACAA TGGATGGCAA TTCAGGGATT TAAAATGTAT
GGCGATGACC TTCTGGGTGA TGAAATCGCG CGCAGCTGGC TGAAAACGGT GAATCAGTTC
TATCTGGAAC AGCACAAAAT GATCGAGAAA TACCATATTG CCGATGGTGT TCCCCGCGAA
GGCGGCGGTG GCGAGTATCC GTTGCAGGAT GGGTTTGGCT GGACTAACGG TGTGGTACGC
CGTTTAATTG GTTTGTACGG CGAACCATAA
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| Protein sequence | MLNQKIQNPN PDELMIEVDL CYELDPYELK LDEMIEAEPE PEMIEGLPAS DALTPADRYL
ELFEHVQSAK IFPDSKTFPD CAPKMDPLDI LIRYRKVRRH RDFDLRKFVE NHFWLPEVYS
SEYVSDPQNS LKEHIDQLWP VLTREPQDHI PWSSLLALPQ SYIVPGGRFS ETYYWDSYFT
MLGLAESGRE DLLKCMADNF AWMIENYGHI PNGNRTYYLS RSQPPVFALM VELFEEDGVR
GARRYLDHLK MEYAFWMDGA ESLIPNQAYR HVVRMPDGSL LNRYWDDRDT PRDESWLEDV
ETAKHSGRPP NEVYRDLRAG AASGWDYSSR WLRDTGRLAS IRTTQFIPID LNAFLFKLES
AIANISALKG EKETEALFRQ KASARRDAVN RYLWDDENGI YRDYDWRREQ LALFSAAAIV
PLYVGMANHE QADRLANAVR SRLLTPGGIL ASEYETGEQW DKPNGWAPLQ WMAIQGFKMY
GDDLLGDEIA RSWLKTVNQF YLEQHKMIEK YHIADGVPRE GGGGEYPLQD GFGWTNGVVR
RLIGLYGEP
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