Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_03225 |
Symbol | rtcR |
ID | 8115286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | + |
Start bp | 3417775 |
End bp | 3419373 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644849402 |
Product | hypothetical protein |
Protein accession | YP_003000975 |
Protein GI | 251786671 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4650] Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.39424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAAAA CAGTGGCTTT TGGCTTTGTC GGTACCGTGC TGGATTATGC CGGGCGCGGC AGTCAGCGCT GGTCGAAATG GCTTCCGACA CTCTGTTTAT GCCAGCAAGA ATCGTTGGTC ATCGATCGAC TGGAATTATT GCATGACGCC CGCTCGCGCT CGCTATTTGA AACGCTTAAA CGCGATATCG CCAGCGTTTC GCCAGAAACA GAAGTGGTGA GCGTTGAGAT TGAACTGCAT AACCCGTGGG ATTTCGAAGA GGTTTACGCT TGCCTGCATG ATTTCGCCCG TGGTTACGAG TTTCAGCCAG AAAAAGAAGA CTATTTAATT CACATTACCA CCGGCACCCA CGTCGCGCAG ATTTGCTGGT TTCTGCTGGC GGAAGCGCGT TACCTGCCCG CCCGGCTGAT ACAATCTTCA CCTCCGCGCA AAAAAGAACA GCCGCGCGGC GCAGGTGAAG TGACGATTAT CGATCTCGAT TTAAGCCGTT ATAACGCCAT CGCCAGCCGC TTTGCCGAGG AACGCCAGCA AACGCTTGAT TTTCTTAAGT CCGGCATTGC CACGCGTAAC CCCCACTTCA ACCGCATGAT TGAGCAGATC GAAAAAGTGG CGATCAAATC CCGCGCGCCG ATTCTGCTTA ACGGTCCAAC CGGCGCGGGC AAGTCATTTC TGGCGCGACG CATCTTCGAG TTAAAACAGG CGCGGCATCA GTTTAGCGGC GCGTTTGTGG AAGTGAACTG CGCCACCCTG CGCGGCGATA CCGCCATGTC GACGCTGTTT GGTCATGTAA AAGGCGCGTT TACCGGGGCG CGGGAATCTC GTGAAGGTTT ATTACGCAGC GCCAACGGCG GAATGTTGTT TCTTGATGAG ATTGGCGAAC TGGGCGCAGA CGAACAAGCA ATGCTGCTAA AAGCCATTGA AGAGAAAACC TTTTACCCGT TTGGCAGCGA TCGCCAGGTG AGCAGTGATT TTCAGCTTAT CGCCGGAACG GTGCGCGATT TGCGCCAGCT GGTTGCCGAA GGCAAATTCC GCGAAGATCT GTACGCGCGG ATCAATCTCT GGACCTTCAC CCTGCCGGGG CTACGCCAGC GCCAGGAAGA TATTGAACCT AACCTGGATT ATGAAGTGGA GCGCCACGCC TCACTCACCG GCGACAGCGT GCGTTTTAAC ACCGAAGCGC GGCGTGCCTG GCTGGCCTTT GCAACATCTC CTCAGGCGAC ATGGCGCGGT AACTTTCGCG AGCTTTCTGC CAGCGTCACG CGGATGGCAA CCTTTGCCAC TAGCGGACGC ATCACTCTGG ACGTGGTTGA AGATGAGATA AACCGTCTGC GCTATAACTG GCAGGAGAGC CGTCCCTCCG CGCTTACGCA ACTGCTGGGC GCAGAGGCAG AAAACATCGA TCTCTTCGAC CGTATGCAAC TGGAACACGT TATCGCTATC TGCCGCCAGG CAAAGTCGCT TTCTGCTGCC GGACGACAGC TTTTTGATGT TTCGCGCCAG GGCAAAGCCA GCGTCAATGA CGCGGATCGG CTACGCAAAT ACCTGGCGCG TTTTGGTCTG ACCTGGGAAG CATTGCAGGA TCAGCACAGC TCCAGTTGA
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Protein sequence | MRKTVAFGFV GTVLDYAGRG SQRWSKWLPT LCLCQQESLV IDRLELLHDA RSRSLFETLK RDIASVSPET EVVSVEIELH NPWDFEEVYA CLHDFARGYE FQPEKEDYLI HITTGTHVAQ ICWFLLAEAR YLPARLIQSS PPRKKEQPRG AGEVTIIDLD LSRYNAIASR FAEERQQTLD FLKSGIATRN PHFNRMIEQI EKVAIKSRAP ILLNGPTGAG KSFLARRIFE LKQARHQFSG AFVEVNCATL RGDTAMSTLF GHVKGAFTGA RESREGLLRS ANGGMLFLDE IGELGADEQA MLLKAIEEKT FYPFGSDRQV SSDFQLIAGT VRDLRQLVAE GKFREDLYAR INLWTFTLPG LRQRQEDIEP NLDYEVERHA SLTGDSVRFN TEARRAWLAF ATSPQATWRG NFRELSASVT RMATFATSGR ITLDVVEDEI NRLRYNWQES RPSALTQLLG AEAENIDLFD RMQLEHVIAI CRQAKSLSAA GRQLFDVSRQ GKASVNDADR LRKYLARFGL TWEALQDQHS SS
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