Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_03223 |
Symbol | rtcA |
ID | 8113664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | - |
Start bp | 3415340 |
End bp | 3416356 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644849400 |
Product | hypothetical protein |
Protein accession | YP_003000973 |
Protein GI | 251786669 |
COG category | [A] RNA processing and modification |
COG ID | [COG0430] RNA 3'-terminal phosphate cyclase |
TIGRFAM ID | [TIGR03399] RNA 3'-phosphate cyclase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00131681 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGGA TGATTGCGCT GGATGGCGCA CAGGGCGAAG GCGGCGGACA GATCCTGCGC TCGGCGCTGA GCCTGTCGAT GATAACCGGC CAGCCATTTA CCATCACTGG CATTCGAGCC GGACGGGCGA AACCGGGGCT GCTGCGCCAG CATCTGACCG CGGTAAAAGC GGCTGCGGAA ATTTGTAGGG CAACGGTGGA AGGTGCGGAG CTGGGATCGC AGCGTCTGCT CTTCCGGCCT GGCACCGTGC GGGGCGGCGA TTACCGCTTT GCTATCGGTA GCGCCGGAAG TTGTACGCTG GTGCTGCAAA CTGTGCTGCC CGCGCTGTGG TTTGCCGATG GACCTTCGCG TGTTGAAGTG AGCGGCGGTA CCGATAACCC GTCGGCGCCA CCTGCGGATT TTATCCGCCG GGTGCTGGAG CCGCTGCTGG CGAAAATGGG AATTCATCAG CAAACCACGC TGTTACGCCA CGGTTTTTAC CCTGCCGGAG GCGGTGTGGT GGCAACGGAA GTCTCGCCCG TGGCATCGTT TAACACCTTG CAACTTGGCG AGCGCGGGAA CATTGTGCAG ATGCGTGGAG AAGTTCTATT AGCTGGTGTG CCGCGCCATG TTGCTGAGCG TGAAATCGCT ACACTGGCGG GGAGTTTTTC CCTGCATGAA CAGAATATTC ATAACCTGCC GCGCGACCAG GGGCCGGGTA ATACCGTCTC GCTTGAAGTC GAAAGTGAAA ATATCACCGA ACGCTTTTTT GTCGTCGGTG AAAAGCGCGT CAGTGCCGAG GTGGTTGCGG CACAGTTGGT GAAAGAGGTG AAACGCTACC TGGCAAGCAC GGCGGCGGTG GGGGAATATC TTGCTGACCA ACTGGTGCTA CCGATGGCGC TGGCGGGCGC GGGGGAATTT ACGGTCGCCC ATCCCTCATG CCATCTGCTG ACCAATATCG CGGTGGTGGA GCGTTTCTTG CCGGTGCGGT TTAGTTTGAT AGAAACAGAT GGCGTAACGC GGGTGAGCAT TGAATGA
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Protein sequence | MKRMIALDGA QGEGGGQILR SALSLSMITG QPFTITGIRA GRAKPGLLRQ HLTAVKAAAE ICRATVEGAE LGSQRLLFRP GTVRGGDYRF AIGSAGSCTL VLQTVLPALW FADGPSRVEV SGGTDNPSAP PADFIRRVLE PLLAKMGIHQ QTTLLRHGFY PAGGGVVATE VSPVASFNTL QLGERGNIVQ MRGEVLLAGV PRHVAEREIA TLAGSFSLHE QNIHNLPRDQ GPGNTVSLEV ESENITERFF VVGEKRVSAE VVAAQLVKEV KRYLASTAAV GEYLADQLVL PMALAGAGEF TVAHPSCHLL TNIAVVERFL PVRFSLIETD GVTRVSIE
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