| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_03135 |
|---|
| Symbol | gspL |
|---|
| ID | 8115707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | + |
|---|
| Start bp | 3323366 |
|---|
| End bp | 3324529 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644849318 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003000891 |
|---|
| Protein GI | 251786587 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3297] Type II secretory pathway, component PulL |
|---|
| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAT CGTTGATGGT CATACGTTCT TCCTCGACGC TGCGTAAGCA TTGGGAATGG
ATGACGTTCT CCGCAGATAG CGTATCTTCG GTACATACGC TCACGGACGA TCTTCCGCTG
GAGTCGCTGG CCGATCAGCC CGGTGCCGGA AATGTTCATC TTTTGATCCC ACCAGAGGGC
CTTTTATATC GTTCCCTCAC GCTGCCCAAC GCCAAATACA AACTCACCGC ACAAACATTA
CAATGGCTGG CAGAGGAGAC GTTACCCGAC AACACCCAGG ACTGGCACTG GACGGTTGTC
GATAAACAAA ACGAAAGTGT CGAGGTGATA GGCATTCAGT CGGAGAAACT CGGTCGCTAT
CTTGAGCGTT TACATACTGC CGGACTCAAC GTGACGCGGG TTTTGCCAGA TGGCTGCTAT
CTTCCCTGGG AAGTAGATAG CTGGACTCTG GTTAACCAGC AAACAAGCTG GCTCATTCGC
AGTGCCGCAC ATGCCTTCAA CGAACTGGAT GAACACTGGT TACAGCATCT TGCTGCCCAG
TTTCCGCCTG AGAATATGCT TTGTTATGGT GTAGTACCTC ACGGCGTTGC AGCGGCCAAT
CCACTTATCC AGCATCCTGA AATACCATCA CTGAGTTTGT ATTCTGCCGA TATTGCATTC
CAGCGCTATG ACATGCTGCA TGGTATTTTT CGTAAACAGA AAACTGTAAG CAAATCGGGA
AAATGGCTCG CCCGCCTGGC AGTAAGCTGT CTCGTTCTCG CCATTCTTTC TTTTGTTGGC
AGCCGGAGCA TCGCGCTCTG GCATACGCTT AAGATTGAAG ATCAACTTCA GCAACAACAG
CAAGAAACCT GGCAACGTTA TTTCCCGCAG ATCAAACGCA CCCACAACTT TCATTTTTAC
TTTAAGCAGC AACTCGCTCA GCAATATCCT GAAGCTGTAC CGTTGCTCTA TCATTTACAA
ACACTTCTGC TGGAACACCC TGAACTGCAG TTAATGGAGG CGAACTATAG CCAGAAGCAA
AAGTCGCTGA CCTTAAAAAT GAGTGCTAAG AGTGAAGCCA ATATCGATCG TTTCTGTGAG
TTAACACAGT CCTGGCTTCC GATGGAAAAA ACAGAAAAAG ATCCGGTCAG TGGTGTATGG
ACAGTAAGGA ACTCAGGGAA ATGA
|
|---|
| Protein sequence | MPESLMVIRS SSTLRKHWEW MTFSADSVSS VHTLTDDLPL ESLADQPGAG NVHLLIPPEG
LLYRSLTLPN AKYKLTAQTL QWLAEETLPD NTQDWHWTVV DKQNESVEVI GIQSEKLGRY
LERLHTAGLN VTRVLPDGCY LPWEVDSWTL VNQQTSWLIR SAAHAFNELD EHWLQHLAAQ
FPPENMLCYG VVPHGVAAAN PLIQHPEIPS LSLYSADIAF QRYDMLHGIF RKQKTVSKSG
KWLARLAVSC LVLAILSFVG SRSIALWHTL KIEDQLQQQQ QETWQRYFPQ IKRTHNFHFY
FKQQLAQQYP EAVPLLYHLQ TLLLEHPELQ LMEANYSQKQ KSLTLKMSAK SEANIDRFCE
LTQSWLPMEK TEKDPVSGVW TVRNSGK
|
|---|
| |