Gene B21_03132 details

Gene Information

• Locus tag: B21_03132
• Symbol: gspI
• ID: 8115704
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21
• Kingdom: Bacteria
• Replicon accession: NC_012892
• Strand: +
• Start bp: 3321418
• End bp: 3321795
• Gene Length: 378 bp
• Protein Length: 125 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 644849315
• Product: hypothetical protein
• Protein accession: YP_003000888
• Protein GI: 251786584
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01707] general secretion pathway protein I; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAAC AATCAGGGAT GACACTGCTT GAAGTCTTAC TGGCGATGAG TATTTTCACC 
GCTGTTGCTC TGACTTTAAT GAGCAGTATG CAAGGGCAAC GAAATGCCAT CGAGCGAATG 
CGTAACGAGA CGCTGGCATT GTGGATAGCG GATAACCAGC TTCAGTCACA AGATTCATTC 
GGCGAGGAAA ACACGTCCAG TTCTGGCAAA GAGTTAATAA ATGGCGAAGA GTGGAACTGG 
CGCAGCGATA TCCACTCAAG CAAAGACGGC ACGCTTCTGG AACGCACCAT AACGGTGACA 
TTACCCAGCG GTCAGACAAC CTCGCTTACG CGTTATCAAA GCATCGATAA TAAATCCGGG 
CAGGCACAAG ATGATTAA 

 

Protein sequence

MNKQSGMTLL EVLLAMSIFT AVALTLMSSM QGQRNAIERM RNETLALWIA DNQLQSQDSF 
GEENTSSSGK ELINGEEWNW RSDIHSSKDG TLLERTITVT LPSGQTTSLT RYQSIDNKSG 
QAQDD