Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_03128 |
Symbol | gspE |
ID | 8115700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | + |
Start bp | 3317783 |
End bp | 3319264 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644849311 |
Product | hypothetical protein |
Protein accession | YP_003000884 |
Protein GI | 251786580 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.182977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATTC ACTCACCGTA CCCCGCCAGT TGGGCGCTGG CACAACGAAT TGGTTATCTC TATTCAGAGG GCGAGATTAT TTATCTCGCC GATACGCCAT TCGAGCGGTT ACTCGATATT CAACGTCAGG TTGGCCAGTG CCAGACCATG ACCAGCTTGT CACAGGCTGA TTTTGAAGCT CGGCTGGAAG CGGTATTCCA TCAGAATACC GGTGAGTCGC AACAGATTGC GCAGGATATC GATCAATCCG TCGATCTTCT CTCGCTTTCG GAAGAGATGC CCGCAAATGA AGATCTCCTG AATGAAGATT CAGCGGCACC GGTTATCCGC TTGATCAATG CGATTTTGAG TGAGGCCATC AAAGAAACCG CCTCTGATAT CCACATTGAA ACCTATGAAA AAACAATGTC GATCCGTTTT CGCATCGACG GCGTTTTGCG GACAATTTTA CAGCCAAACA AAAAACTGGC GGCACTGCTT ATCTCCCGAA TTAAGGTCAT GGCTCGTCTT GATATCGCCG AAAAACGTAT TCCACAGGAT GGAAGAATTA GTTTGCGTAT CGGGCGACGT AACATAGATG TCCGCGTATC CACACTGCCG TCCATCTATG GTGAACGCGC CGTACTCCGC CTGCTGGATA AAAACAGCCT CCAGCTTTCA TTGAACAACC TGGGGATGAC GGCAGCGGAT AAGCAGGATT TAGAAAATCT CATTCAGCTT CCGCACGGTA TTATCCTGGT GACAGGGCCG ACAGGCTCCG GTAAAAGCAC CACGCTCTAC GCCATCCTTT CGGCGCTGAA TACTCCCGGC CGCAATATTC TGACGGTAGA AGATCCCGTG GAATATGAGC TGGAAGGCAT TGGGCAAACG CAGGTGAATA CCCGTGTGGA TATGTCTTTC GCTCGCGGCC TGCGCGCCAT ACTTCGCCAG GACCCGGATG TCGTCATGGT GGGGGAAATT CGTGATACAG AAACCGCGCA GATTGCGGTT CAGGCCTCGC TCACCGGCCA TCTGGTACTC TCAACACTCC ACACTAACAG TGCATCAGGC GCAGTGACCC GGCTCCGCGA CATGGGCTTC GAATCATTCC TGCTTTCGTC TTCCCTGGCA GGGATTATCG CGCAACGTCT GGTTCGTCGC CTGTGTCCGC AATGCCGACA ATTCACGCCC GTATCACCCC AACAAGCGCA GATGTTTAAA TATCATCAGC TCGCGGTGAC AACAATTGGC ACTCCCGTAG GCTGCCCTCA TTGCCATCAA TCCGGCTATC AGGGGCGCAT GGCGATCCAC GAAATGATGG TGGTGACGCC GGAATTACGG GCCGCTATTC ATGAAAATGT GGATGAACAA GCACTGGAGC GACTAGTCCG GCAACAACAC AAGGCCTTAA TCAAAAATGG CCTGCAAAAA GTGATAAGCG GTGACACCTC TTGGGATGAG GTTATGCGCG TCGCCAGTGC CACGCTGGAG AGCGAAGCAT GA
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Protein sequence | MRIHSPYPAS WALAQRIGYL YSEGEIIYLA DTPFERLLDI QRQVGQCQTM TSLSQADFEA RLEAVFHQNT GESQQIAQDI DQSVDLLSLS EEMPANEDLL NEDSAAPVIR LINAILSEAI KETASDIHIE TYEKTMSIRF RIDGVLRTIL QPNKKLAALL ISRIKVMARL DIAEKRIPQD GRISLRIGRR NIDVRVSTLP SIYGERAVLR LLDKNSLQLS LNNLGMTAAD KQDLENLIQL PHGIILVTGP TGSGKSTTLY AILSALNTPG RNILTVEDPV EYELEGIGQT QVNTRVDMSF ARGLRAILRQ DPDVVMVGEI RDTETAQIAV QASLTGHLVL STLHTNSASG AVTRLRDMGF ESFLLSSSLA GIIAQRLVRR LCPQCRQFTP VSPQQAQMFK YHQLAVTTIG TPVGCPHCHQ SGYQGRMAIH EMMVVTPELR AAIHENVDEQ ALERLVRQQH KALIKNGLQK VISGDTSWDE VMRVASATLE SEA
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