| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_03127 |
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| Symbol | gspD |
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| ID | 8115699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012892 |
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| Strand | + |
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| Start bp | 3316757 |
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| End bp | 3317773 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644849310 |
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| Product | hypothetical protein |
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| Protein accession | YP_003000883 |
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| Protein GI | 251786579 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0771412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGAC TCAATAAAAT CACCTGCTGC TTGCTGGCAG CACTACTCAT GCCTTGTGCA
GGACACGCTG AGAACGAACA ATACGGCGCG AACTTCAATA ACGCCGATAT CCGCCAGTTC
GTGGAAATAG TGGGTCAGCA TCTTGGCAAA ACGATCCTGA TCGACCCTTC GGTACAGGGA
ACCATTTCCG TACGCAGTAA TGATACGTTT AGCCAACAGG AGTACTACCA GTTCTTTTTA
AGTATTCTTG ATCTTTACGG TTATTCCGTG ATCACGCTGG ACAATGGTTT TCTGAAAGTG
GTTCGCTCAG CTAATGTAAA AACATCGCCA GGGATGATTG CTGACAGTTC TCGTCCAGGC
GTAGGTGATG AGTTGGTCAC CCGAATCGTA CCGCTTGAGA ACGTTCCTGC TCGTGACCTG
GCCCCCCTGC TCCGCCAGAT GATGGATGCG GGTAGCGTCG GTAATGTTGT GCATTATGAA
CCCTCCAACG TTCTTATTCT GACCGGTCGT GCCTCCACCA TTAATAAACT GATTGAAGTC
ATAAAGCGCG TTGATGTCAT CGGCACAGAG AAGCAGCAAA TTATTCATCT GGAAGTCTCC
AGCGTTGACT CTTCCTCTAA CTCGACGCTC GGCCCGACGT TTAATACCCG TACTATTCAA
AACGCCGTGC TGGTCAAAAC CGGTGAAACG GTGGTCCTGG GCGGATTGCT GGATGATTTT
TCTAAAGAGC AAGTGTCAAA GGTTCCTCTG CTTGGCGATA TTCCTTTAGT GGGGCAACTC
TTCCGCTATA CCTCCACCGA GCGCGCTAAA CGCAACCTGA TGGTATTTAT CCGTCCGACG
ATTATCCGTG ACGATGATGT TTATCGCTCA CTGTCAAAAG AGAAATACAC CCGTTACCGT
CAGGAGCAAC AACAGCGGAT CGACGGGAAA TCAAAAGCGC TGGTTGGCTC GGAAGATTTG
CCGGTGCTGG ATGAAAACAC GTTCAACAGT CACGCCCCTG CGCCATCGTC ACGGTGA
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| Protein sequence | MKGLNKITCC LLAALLMPCA GHAENEQYGA NFNNADIRQF VEIVGQHLGK TILIDPSVQG
TISVRSNDTF SQQEYYQFFL SILDLYGYSV ITLDNGFLKV VRSANVKTSP GMIADSSRPG
VGDELVTRIV PLENVPARDL APLLRQMMDA GSVGNVVHYE PSNVLILTGR ASTINKLIEV
IKRVDVIGTE KQQIIHLEVS SVDSSSNSTL GPTFNTRTIQ NAVLVKTGET VVLGGLLDDF
SKEQVSKVPL LGDIPLVGQL FRYTSTERAK RNLMVFIRPT IIRDDDVYRS LSKEKYTRYR
QEQQQRIDGK SKALVGSEDL PVLDENTFNS HAPAPSSR
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