Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_03126 |
Symbol | gspC |
ID | 8115698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | + |
Start bp | 3315958 |
End bp | 3316773 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644849309 |
Product | hypothetical protein |
Protein accession | YP_003000882 |
Protein GI | 251786578 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3031] Type II secretory pathway, component PulC |
TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.013931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCACAC TACGTTTCCC CTTCCATCTG GCGAATCATA ATAAAGATGC TGCCATCAAT ATATTGATTA TATTTATAAG CATAGGGTCG ATTATTTTTA ATGTGAATTA TTTCCATACA ACTATAGTTA AAAATGGACA GATCATTAAT CAACCAACAA ACGCATTTCA GTCTGATTTC AGCCTTGCCG CTTTATGGCG TAACGAAAAT CATGCTGGGG TAAAAGATGC AAATCCCGTG GCAGTTAATC AGGAAACACC TAAGCTCTCT ATAGCGCTTA ATGGCATTGT ACTCACATCG AATGATGAGA CTTCTTTTGT CTTAATTAAT GAGGGGAGCG AACAAAAGCG ATACTCCCTC AACGAAGCCC TTGAGTCAGC GCCGGGAACG TTTATTAGAA AAATAAATAA AACCAGCGTT GTGTTTGAAA CTCACGGGCA TTACGAAAAA GTAACTCTCC ATCCAGGGCT ACCTGACATC ATCAAGCAGC CTGATTCAGA AAGTCAAAAT GTACTCGCTG ATTATATTAT CGCCACGCCT ATACGTGATG GAGAACAGAT ATACGGGCTT CGATTGAACC CTCGTAAGGG CCTCAATGCA TTTACCACCA GCTTGCTACA ACCAGGGGAT ATCGCCCTCA GGATCAATAA TCTTTCGCTG ACCCACCCTG ATGAGGTTTC ACAGGCATTA AGTTTACTGC TAACTCAACA AAGTGCTCAG TTTACAATTC GTCGCAACGG CGTACCCCGC TTGATAAATG TTTCCGTCGG GGAACTTACA GGAATGAATG GACTGCGTCA TGAAAGGACT CAATAA
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Protein sequence | MPTLRFPFHL ANHNKDAAIN ILIIFISIGS IIFNVNYFHT TIVKNGQIIN QPTNAFQSDF SLAALWRNEN HAGVKDANPV AVNQETPKLS IALNGIVLTS NDETSFVLIN EGSEQKRYSL NEALESAPGT FIRKINKTSV VFETHGHYEK VTLHPGLPDI IKQPDSESQN VLADYIIATP IRDGEQIYGL RLNPRKGLNA FTTSLLQPGD IALRINNLSL THPDEVSQAL SLLLTQQSAQ FTIRRNGVPR LINVSVGELT GMNGLRHERT Q
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