Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_03078 |
Symbol | yhdX |
ID | 8114044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | + |
Start bp | 3280501 |
End bp | 3281682 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644849261 |
Product | hypothetical protein |
Protein accession | YP_003000834 |
Protein GI | 251786530 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4597] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCATC GCCGCTCAAC CGTTAAAGGC TCACTCTCCT TTGCCAACCC TACGGTTCGT GCCTGGTTAT TCCAGATCCT TGCCGTTGTT GCTGTTGTCG GCATTGTTGG TTGGTTATTT CACAACACTG TAACGAATCT CAATAATCGT GGCATTACTT CAGGTTTTGC CTTTCTGGAT CGCAGCGCTG GCTTCGGTAT TGTCCAGCAT TTGATCGATT ACCAGCAGGG CGACACCTAC GGACGCGTTT TTATTGTCGG CTTACTCAAT ACGCTACTGG TTTCTGCATT GTGTATTGTG TTCGCTTCTG TTTTGGGCTT CTTTATCGGT CTGGCGAGAC TTTCGGATAA CTGGCTGCTA CGAAAGCTTT CCACAATTTA TATTGAGATC TTCCGTAATA TTCCCCCGCT GCTGCAAATC TTCTTCTGGT ACTTTGCCGT GTTGCGCAAT TTGCCCGGAC CACGCCAGGC TGTGAGCGCG TTTGATCTGG CCTTTTTGAG CAATCGTGGG CTTTATATTC CGTCACCGCA GCTGGGAGAC GGATTTATTG CGTTTATCCT GGCTGTTGTT ATGGCTATAG TCCTTTCTGT TGGGCTATTC CGCTTTAATA AAACATACCA GATAAAGACC GGACAACTGC GCCGCACCTG GCCGATCGCC GCAGTGTTGA TCATTGGTTT GCCTTTACTG GCGCAATGGC TTTTTGGCGC AGCACTACAC TGGGATGTCC CAGCCCTACG AGGCTTTAAC TTCCGCGGCG GGATGGTTTT AATTCCTGAA CTGGCAGCCT TAACGCTGGC ACTTTCGGTT TATACCTCTG CATTTATCGC CGAGATTATC CGCGCTGGGA TCCAGGCAGT GCCTTATGGT CAACATGAAG CGGCTCGGTC ACTGGGATTA CCCAACCCGG TTACGCTACG CCAGGTCATT ATTCCCCAGG CATTGCGGGT GATTATTCCA CCGTTAACCA GCCAGTATCT CAACATCGTC AAAAACTCCT CTCTTGCCGC CGCTATTGGC TATCCCGATA TGGTTTCGCT GTTTGCCGGC ACCGTGCTGA ATCAGACGGG GCAAGCCATC GAGACGATAG CCATGACCAT GTCGGTCTAT CTGATTATCA GCCTGACTAT CTCGCTGCTG ATGAATATCT ATAACCGCCG CATCGCGATC GTTGAACGCT AA
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Protein sequence | MSHRRSTVKG SLSFANPTVR AWLFQILAVV AVVGIVGWLF HNTVTNLNNR GITSGFAFLD RSAGFGIVQH LIDYQQGDTY GRVFIVGLLN TLLVSALCIV FASVLGFFIG LARLSDNWLL RKLSTIYIEI FRNIPPLLQI FFWYFAVLRN LPGPRQAVSA FDLAFLSNRG LYIPSPQLGD GFIAFILAVV MAIVLSVGLF RFNKTYQIKT GQLRRTWPIA AVLIIGLPLL AQWLFGAALH WDVPALRGFN FRGGMVLIPE LAALTLALSV YTSAFIAEII RAGIQAVPYG QHEAARSLGL PNPVTLRQVI IPQALRVIIP PLTSQYLNIV KNSSLAAAIG YPDMVSLFAG TVLNQTGQAI ETIAMTMSVY LIISLTISLL MNIYNRRIAI VER
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