| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_03063 |
|---|
| Symbol | yhdH |
|---|
| ID | 8114035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | + |
|---|
| Start bp | 3263850 |
|---|
| End bp | 3264824 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644849246 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003000819 |
|---|
| Protein GI | 251786515 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0710671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCGT TACTTTTAGA ACAGCAGGAC GGCAAAACTC TCGCATCAGT ACAGACTCTG
GACGAAAGTC GCCTGCCGGA GGGCGATGTC ACGGTCGATG TTCACTGGTC GAGCCTGAAC
TATAAAGATG CGCTGGCGAT TACCGGTAAG GGAAAAATCA TCCGTAATTT TCCGATGATT
CCTGGGATCG ATTTTGCCGG AACTGTACGC ACCAGCGAAG ATCCGCGTTT TCATGCCGGT
CAGGAGGTGT TACTCACTGG CTGGGGCGTT GGTGAAAACC ACTGGGGTGG GCTGGCGGAG
CAGGCGCGAG TGAAAGGTGA CTGGCTGGTT GCCATGCCGC AAGGGCTGGA CGCGCGTAAA
GCAATGATTA TCGGTACTGC CGGTTTTACC GCCATGCTGT GTGTGATGGC GCTGGAAGAT
GCCGGTGTTC GCCCGCAGGA CGGGGAGATT GTCGTGACGG GTGCCAGTGG TGGCGTCGGC
AGTACCGCCG TGGCGCTGCT GCATAAGTTG GGTTATCAGG TCGTTGCCGT TTCCGGTCGC
GAAAGTACCC ATGAATATCT GAAAAGTTTA GGTGCTAGCC GTGTTCTCCC TCGTGATGAG
TTTGCCGAAT CCCGTCCTCT GGAAAAACAA GTCTGGGCTG GGGCAATTGA CACCGTTGGC
GACAAAGTGC TGGCAAAAGT GCTGGCGCAA ATGAATTACG GCGGCTGCGT GGCGGCCTGT
GGTCTGGCGG GTGGTTTTAC TCTGCCAACC ACGGTCATGC CATTTATTCT GCGTAATGTC
CGTTTGCAAG GGGTGGATTC AGTAATGACG CCACCAGAAC GCCGCGCACA AGCCTGGCAG
CGACTGGTCG CCGATTTACC GGAATCATTC TATACCCAGG CGGCAAAAGA GATATCTCTG
TCAGAGGCAC CGAACTTTGC CGAGGCCATC ATTAATAACC AGATCCAGGG TCGCACGCTG
GTGAAGGTTA ACTAA
|
|---|
| Protein sequence | MQALLLEQQD GKTLASVQTL DESRLPEGDV TVDVHWSSLN YKDALAITGK GKIIRNFPMI
PGIDFAGTVR TSEDPRFHAG QEVLLTGWGV GENHWGGLAE QARVKGDWLV AMPQGLDARK
AMIIGTAGFT AMLCVMALED AGVRPQDGEI VVTGASGGVG STAVALLHKL GYQVVAVSGR
ESTHEYLKSL GASRVLPRDE FAESRPLEKQ VWAGAIDTVG DKVLAKVLAQ MNYGGCVAAC
GLAGGFTLPT TVMPFILRNV RLQGVDSVMT PPERRAQAWQ RLVADLPESF YTQAAKEISL
SEAPNFAEAI INNQIQGRTL VKVN
|
|---|
| |