| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_03035 |
|---|
| Symbol | nanT |
|---|
| ID | 8112697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | - |
|---|
| Start bp | 3231454 |
|---|
| End bp | 3232944 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644849220 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003000793 |
|---|
| Protein GI | 251786489 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00891] putative sialic acid transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACTA CAACCCAGAA TATCCCGTGG TATCGCCATC TCAACCGTGC ACAATGGCGC
GCATTTTCCG CTGCCTGGTT GGGATATCTG CTTGACGGTT TTGATTTCGT TTTAATCGCC
CTGGTACTCA CCGAAGTACA GGGTGAATTC GGGCTGACGA CGGTGCAGGC GGCAAGTCTG
ATCTCTGCAG CCTTTATCTC TCGCTGGTTC GGCGGCCTGA TGCTCGGCGC TATGGGTGAC
CGCTACGGGC GTCGTCTGGC AATGGTCACC AGCATCGTTC TCTTCTCGGC CGGGACGCTG
GCCTGCGGCT TTGCGCCAGG CTACATCACC ATGTTTATCG CTCGTCTGGT CATCGGCATG
GGGATGGCGG GTGAATACGG TTCCAGCGCC ACCTATGTCA TTGAAAGCTG GCCAAAACAT
CTGCGTAACA AAGCCAGTGG TTTTTTGATT TCAGGCTTCT CTGTGGGGGC CGTCGTTGCC
GCTCAGGTCT ATAGCCTGGT GGTTCCGGTC TGGGGCTGGC GTGCGCTGTT CTTTATCGGC
ATTTTGCCAA TCATCTTTGC TCTCTGGCTG CGTAAAAACA TCCCGGAAGC GGAAGACTGG
AAAGAGAAAC ACGCAGGTAA AGCACCAGTA CGCACAATGG TGGATATTCT CTACCGTGGT
GAACATCGCA TTGCCAATAT CGTAATGACA CTGGCGGCGG CTACTGCGCT GTGGTTCTGC
TTCGCCGGTA ACCTGCAAAA TGCCGCGATC GTCGCTGTTC TTGGGCTGTT ATGCGCCGCA
ATCTTTATCA GCTTTATGGT GCAGAGTACA GGCAAACGCT GGCCAACGGG CGTAATGCTG
ATGGTGGTCG TGTTGTTTGC TTTCCTCTAC TCATGGCCGA TTCAGGCGCT GCTGCCAACG
TATCTGAAAA CCGATCTGGC TTATAACCCG CATACTGTAG CCAATGTGCT GTTCTTTAGT
GGCTTTGGCG CGGCGGTGGG ATGCTGCGTA GGTGGCTTCC TCGGTGACTG GCTGGGAACC
CGCAAAGCGT ACGTTTGTAG CCTGCTGGCC TCGCAGCTGC TGATTATTCC GGTATTTGCG
ATTGGCGGCG CAAACGTCTG GGTGCTCGGT CTGTTACTGT TCTTCCAGCA AATGCTTGGA
CAAGGGATCG CCGGGATCTT ACCAAAACTG ATTGGCGGTT ATTTCGATAC CGACCAGCGT
GCAGCGGGCC TGGGCTTTAC CTACAACGTT GGCGCATTGG GCGGTGCACT GGCCCCAATC
ATCGGCGCGT TGATCGCTCA ACGTCTGGAT CTGGGTACTG CGCTGGCATC GCTCTCGTTC
AGTCTGACGT TCGTGGTGAT CCTGCTGATT GGGCTGGATA TGCCTTCTCG CGTTCAGCGT
TGGTTGCGCC CGGAAGCGTT GCGTACTCAT GACGCTATCG ACGGTAAACC ATTCAGCGGT
GCCGTGCCGT TTGGCAGCGC CAAAAACGAT TTAGTCAAAA CCAAAAGTTA A
|
|---|
| Protein sequence | MSTTTQNIPW YRHLNRAQWR AFSAAWLGYL LDGFDFVLIA LVLTEVQGEF GLTTVQAASL
ISAAFISRWF GGLMLGAMGD RYGRRLAMVT SIVLFSAGTL ACGFAPGYIT MFIARLVIGM
GMAGEYGSSA TYVIESWPKH LRNKASGFLI SGFSVGAVVA AQVYSLVVPV WGWRALFFIG
ILPIIFALWL RKNIPEAEDW KEKHAGKAPV RTMVDILYRG EHRIANIVMT LAAATALWFC
FAGNLQNAAI VAVLGLLCAA IFISFMVQST GKRWPTGVML MVVVLFAFLY SWPIQALLPT
YLKTDLAYNP HTVANVLFFS GFGAAVGCCV GGFLGDWLGT RKAYVCSLLA SQLLIIPVFA
IGGANVWVLG LLLFFQQMLG QGIAGILPKL IGGYFDTDQR AAGLGFTYNV GALGGALAPI
IGALIAQRLD LGTALASLSF SLTFVVILLI GLDMPSRVQR WLRPEALRTH DAIDGKPFSG
AVPFGSAKND LVKTKS
|
|---|
| |