| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_02943 |
|---|
| Symbol | garP |
|---|
| ID | 8115505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | - |
|---|
| Start bp | 3138973 |
|---|
| End bp | 3140307 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644849129 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003000702 |
|---|
| Protein GI | 251786398 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTGG ACACTGTTGA CGAAAAAAAG AAAGGCGTGC ATACCCGCTA TTTAATATTA
CTGATTATTT TTATTGTTAC CGCCGTTAAC TACGCCGATC GTGCAACGCT GTCTATTGCT
GGTACCGAAG TGGCAAAAGA GTTGCAGTTA AGTGCGGTTT CGATGGGTTA CATCTTCTCC
GCTTTTGGCT GGGCCTACTT GCTGATGCAA ATCCCCGGCG GCTGGCTGCT TGATAAGTTT
GGCTCGAAAA AAGTTTACAC CTACAGCCTC TTTTTCTGGT CGCTATTCAC CTTCCTGCAA
GGCTTTGTTG ATATGTTCCC GCTGGCCTGG GCAGGGATCT CCATGTTCTT TATGCGCTTT
ATGCTCGGCT TCTCGGAAGC GCCATCATTC CCGGCGAACG CCCGAATTGT CGCCGCCTGG
TTCCCGACGA AAGAACGTGG TACTGCCTCC GCCATCTTTA ACTCGGCGCA ATATTTCTCG
CTGGCGCTCT TTTCGCCGCT GCTTGGCTGG CTGACTTTCG CCTGGGGCTG GGAGCACGTC
TTTACCGTTA TGGGGGTGAT TGGTTTTGTG CTGACGGCGC TGTGGATCAA GTTGATTCAT
AACCCGACAG ATCACCCACG TATGTCTGCG GAAGAGCTGA AGTTTATCTC TGAAAATGGC
GCGGTGGTCG ATATGGACCA CAAAAAGCCG GGCAGTGCGG CAGCAAGCGG ACCCAAACTG
CATTACATCA AGCAATTGCT CTCTAACCGC ATGATGCTGG GCGTATTTTT CGGACAATAT
TTTATCAACA CCATCACCTG GTTCTTCCTC ACCTGGTTCC CGATTTATCT GGTGCAGGAA
AAAGGCATGT CGATTCTGAA AGTGGGTCTG GTCGCCTCGA TTCCAGCACT GTGTGGTTTT
GCGGGCGGCG TGCTGGGAGG TGTCTTCTCG GATTATCTGA TCAAACGCGG TTTATCCCTG
ACCCTGGCAC GTAAGCTACC GATTGTGCTG GGAATGTTGC TGGCTTCCAC CATCATCTTA
TGTAACTACA CCAACAACAC CACGCTGGTG GTCATGCTGA TGGCGCTGGC TTTCTTTGGC
AAAGGATTTG GTGCGCTGGG CTGGCCGGTG ATTTCTGACA CCGCGCCGAA AGAGATTGTT
GGCCTCTGCG GCGGCGTCTT TAACGTCTTT GGCAATGTTG CCTCCATTGT CACTCCACTG
GTGATTGGCT ACCTGGTAAG TGAACTGCAC TCCTTCAATG CAGCACTGGT TTTCGTGGGA
TGTTCAGCGC TGATGGCGAT GGTCTGCTAC CTCTTCGTAG TTGGCGACAT TAAACGTATG
GAATTGCAGA AATAA
|
|---|
| Protein sequence | MILDTVDEKK KGVHTRYLIL LIIFIVTAVN YADRATLSIA GTEVAKELQL SAVSMGYIFS
AFGWAYLLMQ IPGGWLLDKF GSKKVYTYSL FFWSLFTFLQ GFVDMFPLAW AGISMFFMRF
MLGFSEAPSF PANARIVAAW FPTKERGTAS AIFNSAQYFS LALFSPLLGW LTFAWGWEHV
FTVMGVIGFV LTALWIKLIH NPTDHPRMSA EELKFISENG AVVDMDHKKP GSAAASGPKL
HYIKQLLSNR MMLGVFFGQY FINTITWFFL TWFPIYLVQE KGMSILKVGL VASIPALCGF
AGGVLGGVFS DYLIKRGLSL TLARKLPIVL GMLLASTIIL CNYTNNTTLV VMLMALAFFG
KGFGALGWPV ISDTAPKEIV GLCGGVFNVF GNVASIVTPL VIGYLVSELH SFNAALVFVG
CSALMAMVCY LFVVGDIKRM ELQK
|
|---|
| |