| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_02842 |
|---|
| Symbol | ygiS |
|---|
| ID | 8114299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | - |
|---|
| Start bp | 3032752 |
|---|
| End bp | 3034359 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644849030 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003000603 |
|---|
| Protein GI | 251786299 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.81173 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATACGC GAAATTTATT ATGGCTGGTC AGCCTGGTAA GTGCGGCTCC TCTCTACGCT
GCTGACGTTC CCGCCAACAC ACCGCTCGCC CCGCAACAAG TCTTTCGTTA CAACAATCAT
AGCGACCCAG GTACGCTCGA CCCGCAAAAG GTGGAGGAGA ATACTGCCGC GCAGATTGTG
CTGGATCTGT TTGAAGGTCT GGTATGGATG GACGGTGAAG GCCAGGTGCA GCCCGCTCAG
GCTGAACGCT GGGAGATACT GGACGGCGGC AAGCGCTATA TTTTCCATCT GCGTAGCGGT
TTGCAGTGGT CCGACGGTCA GCCTCTGACG GCAGAGGATT TTGTCCTCGG CTGGCAGCGC
GCGGTTGACC CGAAAACGGC AAGCCCTTTT GCTGGCTATC TGGCACAGGC GCACATTAAC
AATGCCGCAG CTATTGTTGC GGGTAAAGCA GATGTTACAT CGCTGGGTGT CAAAGCGACG
GATGATCGTA CTCTTGAAGT TACGCTTGAG CAGCCGGTTC CTTGGTTCAC GACGATGCTC
GCCTGGCCGA CGCTGTTCCC GGTTCCTCAT CATGTCATCG CTAAACATGG CGATAGCTGG
AGTAAGCCAG AGAACATGGT TTACAACGGT GCCTTTGTGC TTGATCAGTG GGTAGTTAAC
GAAAAGATTA CTGCACGCAA AAATCCAAAG TACCGCGATG CGCAACATAC AGTATTGCAA
CAGGTTGAGT ATCTGGCGCT AGATAATTCG GTCACCGGCT ATAACCGCTA TCGCGCGGGA
GAGGTCGATC TCACCTGGGT TCCGGCGCAG CAAATTCCCG CCATTGAAAA ATCACTGCCT
GGCGAGCTAC GAATTATTCC GCGTCTGAAC AGCGAATATT ACAACTTCAA CCTTGAGAAA
CCGCCATTTA ACGATGTGCG AGTGCGTCGG GCGCTATATC TTACGGTTGA TCGACAGCTT
ATTGCGCAAA AGGTACTGGG GTTGAGAACG CCCGCAACCA CGCTGACGCC GCCAGAGGTA
AAAGGCTTTA GCGCGACGAC GTTCGATGAA CTGCAAAAGC CAATGAGTGA GCGCGTCGCG
ATGGCAAAAG CCTTGCTGAA ACAGGCGGGA TACGACGCCT CTCATCCGCT ACGCTTTGAG
CTGTTCTACA ACAAGTACGA TCTGCATGAA AAGACCGCGA TAGCGTTGTC TTCCGAATGG
AAAAAATGGC TGGGTGCACA GGTGACGCTG CGCACAATGG AGTGGAAAAC CTATCTTGAT
GCCCGACGAG CCGGTGATTT CATGCTGTCT CGGCAGTCGT GGGATGCGAC GTACAATGAT
GCTTCCAGCT TCCTGAACAC GCTCAAAAGC GATAGTGAAG AAAACGTCGG TCACTGGAAA
AATGCGCAGT ATGACGCCTT ACTAAACCAG GCCACGCAGA TCACTGATGC GACAAAGCGT
AATGCGTTGT ATCAGCAGGC AGAAGTGATC ATCAACCAAC AGGCACCGCT GATTCCTATC
TACTATCAGC CGTTAATCAA ACTGCTTAAA CCCTACGTTG GCGGTTTTCC GCTGCATAAT
CCCCAGGATT ATGTCTACAG CAAAGAGTTG TATATCAAGG CACATTGA
|
|---|
| Protein sequence | MYTRNLLWLV SLVSAAPLYA ADVPANTPLA PQQVFRYNNH SDPGTLDPQK VEENTAAQIV
LDLFEGLVWM DGEGQVQPAQ AERWEILDGG KRYIFHLRSG LQWSDGQPLT AEDFVLGWQR
AVDPKTASPF AGYLAQAHIN NAAAIVAGKA DVTSLGVKAT DDRTLEVTLE QPVPWFTTML
AWPTLFPVPH HVIAKHGDSW SKPENMVYNG AFVLDQWVVN EKITARKNPK YRDAQHTVLQ
QVEYLALDNS VTGYNRYRAG EVDLTWVPAQ QIPAIEKSLP GELRIIPRLN SEYYNFNLEK
PPFNDVRVRR ALYLTVDRQL IAQKVLGLRT PATTLTPPEV KGFSATTFDE LQKPMSERVA
MAKALLKQAG YDASHPLRFE LFYNKYDLHE KTAIALSSEW KKWLGAQVTL RTMEWKTYLD
ARRAGDFMLS RQSWDATYND ASSFLNTLKS DSEENVGHWK NAQYDALLNQ ATQITDATKR
NALYQQAEVI INQQAPLIPI YYQPLIKLLK PYVGGFPLHN PQDYVYSKEL YIKAH
|
|---|
| |