Gene B21_02798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagB21_02798 
SymbolglcD 
ID8115529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21 
KingdomBacteria 
Replicon accessionNC_012892 
Strand
Start bp2985965 
End bp2987464 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content56% 
IMG OID644848988 
Producthypothetical protein 
Protein accessionYP_003000561 
Protein GI251786257 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR00387] glycolate oxidase, subunit GlcD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.160001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCT TGTACGAAGA GCGTCTTGAT GGCGCTTTAC CCGATGTCGA CCGCACATCG 
GTACTGATGG CACTGCGTGA GCATGTCCCT GGACTTGAGA TCCTGCATAC CGAAGAGGAG
ATCATTCCTT ACGAGTGTGA CGGGTTGAGC GCGTATCGCA CGCGTCCATT ACTGGTTGTT
CTGCCTAAGC AAATGGAACA GGTGACAGCG ATTCTTGCTG TCTGCCATCG CCTGCGTGTA
CCGGTGGTGA CCCGTGGTGC AGGCACCGGG CTTTCTGGTG GCGCGCTGCC GCTGGAAAAA
GGTGTGTTGT TGGTGATGGC GCGCTTTAAA GAGATCCTCG ACATTAACCC CGTTGGTCGC
CGCGCGCGCG TGCAGCCTGG AGTGCGTAAC CTGGCGATCT CCCAGGCCGT TGCGCCGCAT
AATCTCTACT ACGCACCGGA CCCTTCCTCA CAAATAGCCT GTTCAATTGG CGGCAATGTG
GCGGAAAATG CCGGTGGCGT CCACTGCCTG AAATATGGTC TGACCGTACA TAACCTGCTG
AAAATTGAAG TGCAAACGCT GAACGGCGAG GCGCTGACGC TGGGATCGGA CGCGCTGGAT
TCACCTGGTT TTGACCTGCT GGCGCTGTTC ACCGGATCGG AAGGTATGCT CGGCGTGACC
ACCGAAGTGA CGGTAAAACT GCTGCCGAAG CCGCCCGTGG CGCGGGTTCT GTTAGCCAGC
TTTGACTCGG TAGAAAAAGC CGGACTTGCA GTTGGTGACA TCATCGCCAA TGGCATTATC
CCCGGCGGGC TGGAGATGAT GGATAACCTG TCGATCCGCG CGGCGGAAGA TTTTATTCAT
GCCGGTTATC CCGTCGACGC CGAAGCGATT TTGTTATGCG AGCTGGACGG CGTGGAGTCT
GACGTACAGG AAGACTGCGA GCGGGTTAAC GACATCTTGT TGAAAGCGGG CGCGACTGAC
GTCCGTCTGG CACAGGACGA AGCAGAGCGC GTACGTTTCT GGGCCGGTCG CAAAAATGCG
TTCCCGGCGG TAGGACGTAT CTCCCCGGAT TACTACTGCA TGGATGGCAC CATCCCGCGT
CGCGCCCTGC CTGGCGTACT GGAAGGCATT GCCCGTTTAT CGCAGCAATA TGATTTACGT
GTTGCCAACG TCTTTCATGC CGGAGATGGC AACATGCACC CGTTAATCCT TTTCGATGCC
AACGAACCCG GTGAATTTGC CCGCGCGGAA GAGCTGGGTG GGAAGATCCT CGAACTCTGC
GTTGAAGTTG GCGGCAGCAT CAGTGGGGAA CATGGCATCG GGCGAGAAAA AATCAATCAA
ATGTGCGCCC AGTTCAACAG CGATGAAATC ACGACCTTGC ATGCGGTCAA GGCGGCGTTT
GACCCCGATG GTTTGCTGAA CCCTGGGAAA AACATTCCCA CGCTACACCG CTGTGCTGAA
TTTGGTGCCA TGCATGTGCA TCACGGTCAT TTACCTTTCC CTGAACTGGA GCGTTTCTGA
 
Protein sequence
MSILYEERLD GALPDVDRTS VLMALREHVP GLEILHTEEE IIPYECDGLS AYRTRPLLVV 
LPKQMEQVTA ILAVCHRLRV PVVTRGAGTG LSGGALPLEK GVLLVMARFK EILDINPVGR
RARVQPGVRN LAISQAVAPH NLYYAPDPSS QIACSIGGNV AENAGGVHCL KYGLTVHNLL
KIEVQTLNGE ALTLGSDALD SPGFDLLALF TGSEGMLGVT TEVTVKLLPK PPVARVLLAS
FDSVEKAGLA VGDIIANGII PGGLEMMDNL SIRAAEDFIH AGYPVDAEAI LLCELDGVES
DVQEDCERVN DILLKAGATD VRLAQDEAER VRFWAGRKNA FPAVGRISPD YYCMDGTIPR
RALPGVLEGI ARLSQQYDLR VANVFHAGDG NMHPLILFDA NEPGEFARAE ELGGKILELC
VEVGGSISGE HGIGREKINQ MCAQFNSDEI TTLHAVKAAF DPDGLLNPGK NIPTLHRCAE
FGAMHVHHGH LPFPELERF