Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_02798 |
Symbol | glcD |
ID | 8115529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | - |
Start bp | 2985965 |
End bp | 2987464 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644848988 |
Product | hypothetical protein |
Protein accession | YP_003000561 |
Protein GI | 251786257 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.160001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCATCT TGTACGAAGA GCGTCTTGAT GGCGCTTTAC CCGATGTCGA CCGCACATCG GTACTGATGG CACTGCGTGA GCATGTCCCT GGACTTGAGA TCCTGCATAC CGAAGAGGAG ATCATTCCTT ACGAGTGTGA CGGGTTGAGC GCGTATCGCA CGCGTCCATT ACTGGTTGTT CTGCCTAAGC AAATGGAACA GGTGACAGCG ATTCTTGCTG TCTGCCATCG CCTGCGTGTA CCGGTGGTGA CCCGTGGTGC AGGCACCGGG CTTTCTGGTG GCGCGCTGCC GCTGGAAAAA GGTGTGTTGT TGGTGATGGC GCGCTTTAAA GAGATCCTCG ACATTAACCC CGTTGGTCGC CGCGCGCGCG TGCAGCCTGG AGTGCGTAAC CTGGCGATCT CCCAGGCCGT TGCGCCGCAT AATCTCTACT ACGCACCGGA CCCTTCCTCA CAAATAGCCT GTTCAATTGG CGGCAATGTG GCGGAAAATG CCGGTGGCGT CCACTGCCTG AAATATGGTC TGACCGTACA TAACCTGCTG AAAATTGAAG TGCAAACGCT GAACGGCGAG GCGCTGACGC TGGGATCGGA CGCGCTGGAT TCACCTGGTT TTGACCTGCT GGCGCTGTTC ACCGGATCGG AAGGTATGCT CGGCGTGACC ACCGAAGTGA CGGTAAAACT GCTGCCGAAG CCGCCCGTGG CGCGGGTTCT GTTAGCCAGC TTTGACTCGG TAGAAAAAGC CGGACTTGCA GTTGGTGACA TCATCGCCAA TGGCATTATC CCCGGCGGGC TGGAGATGAT GGATAACCTG TCGATCCGCG CGGCGGAAGA TTTTATTCAT GCCGGTTATC CCGTCGACGC CGAAGCGATT TTGTTATGCG AGCTGGACGG CGTGGAGTCT GACGTACAGG AAGACTGCGA GCGGGTTAAC GACATCTTGT TGAAAGCGGG CGCGACTGAC GTCCGTCTGG CACAGGACGA AGCAGAGCGC GTACGTTTCT GGGCCGGTCG CAAAAATGCG TTCCCGGCGG TAGGACGTAT CTCCCCGGAT TACTACTGCA TGGATGGCAC CATCCCGCGT CGCGCCCTGC CTGGCGTACT GGAAGGCATT GCCCGTTTAT CGCAGCAATA TGATTTACGT GTTGCCAACG TCTTTCATGC CGGAGATGGC AACATGCACC CGTTAATCCT TTTCGATGCC AACGAACCCG GTGAATTTGC CCGCGCGGAA GAGCTGGGTG GGAAGATCCT CGAACTCTGC GTTGAAGTTG GCGGCAGCAT CAGTGGGGAA CATGGCATCG GGCGAGAAAA AATCAATCAA ATGTGCGCCC AGTTCAACAG CGATGAAATC ACGACCTTGC ATGCGGTCAA GGCGGCGTTT GACCCCGATG GTTTGCTGAA CCCTGGGAAA AACATTCCCA CGCTACACCG CTGTGCTGAA TTTGGTGCCA TGCATGTGCA TCACGGTCAT TTACCTTTCC CTGAACTGGA GCGTTTCTGA
|
Protein sequence | MSILYEERLD GALPDVDRTS VLMALREHVP GLEILHTEEE IIPYECDGLS AYRTRPLLVV LPKQMEQVTA ILAVCHRLRV PVVTRGAGTG LSGGALPLEK GVLLVMARFK EILDINPVGR RARVQPGVRN LAISQAVAPH NLYYAPDPSS QIACSIGGNV AENAGGVHCL KYGLTVHNLL KIEVQTLNGE ALTLGSDALD SPGFDLLALF TGSEGMLGVT TEVTVKLLPK PPVARVLLAS FDSVEKAGLA VGDIIANGII PGGLEMMDNL SIRAAEDFIH AGYPVDAEAI LLCELDGVES DVQEDCERVN DILLKAGATD VRLAQDEAER VRFWAGRKNA FPAVGRISPD YYCMDGTIPR RALPGVLEGI ARLSQQYDLR VANVFHAGDG NMHPLILFDA NEPGEFARAE ELGGKILELC VEVGGSISGE HGIGREKINQ MCAQFNSDEI TTLHAVKAAF DPDGLLNPGK NIPTLHRCAE FGAMHVHHGH LPFPELERF
|
| |