| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_02743 |
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| Symbol | yggR |
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| ID | 8115883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012892 |
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| Strand | - |
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| Start bp | 2924163 |
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| End bp | 2925143 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644848934 |
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| Product | hypothetical protein |
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| Protein accession | YP_003000507 |
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| Protein GI | 251786203 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.390847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATGG AAGAAATTGT GGCCCTTAGT GTAAAGCATA ACGTCTCGGA TCTACACCTG
TGCAGCGCCT GGCCCGCACG ATGGCGCATT CGCGGGCGAA TGGAAGCTGC GCCGTTTGAT
GCGCCGGACG TCGAAGAGCT ACTGCGGGAG TGGCTGGATG ACGATCAGCG GGCAATATTG
CTGGAAAATG GCCAGCTGGA TTTTGCCGTG TCGCTGGCGG AAAACCAGCG ATTGCGTGGC
AGCGCATTCG CGCAACGGCA TGGCATTTCG CTGGCGTTAC GGCTGTTACC TTCGCACTGC
CCGCAGCTCG AACAGCTTGG CGCACCAACG GTATTGCCGG AATTACTCAA GAGCGAGAAT
GGCCTGATTC TGGTGACGGG GGCGACGGGG AGCGGCAAAT CTACCACGCT GGCGGCGATG
GTTGGCTATC TCAATCAACA TGCCGATGCG CATATTCTGA CGCTGGAAGA TCCTGTTGAA
TATCTCTATG CCAGCCAGCG ATGTTTGATC CAGCAGCGGG AAATTGGTTT GCACTGTATG
ACGTTCGCAT CGGGATTGCG GGCCGCATTG CGGGAAGATC CTGATGTGAT TTTGCTCGGA
GAGCTGCGTG ACAGCGAGAC AATCCGTCTG GCACTGACGG CGGCAGAAAC CGGGCATTTG
GTGCTGGCAA CATTACATAC GCGTGGTGCC GCGCAGTCAG TTGAGCGACT GGTGGATTCA
TTTCCGGCGC AGGAAAAAGA TCCCGTACGT AATCAACTGG CAGGGAGTTT ACGGGCCGTG
TTGTCACAAA AGCTGGAAGT GGATAAACAG GAAGGACGCG TGGCGCTATT TGAATTGCTG
ATTAACACAC CCGCGGTGGG GAATTTGATT CGCGAAGGGA AAACCCACCA GTTACCGCAT
GTTATTCAAA CCGGGCAGCA GGTGGGGATG ATAACGTTTC AGCAGAGTTA TCAGCACCGG
GTGGGGGAAG GGCGTTTGTG A
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| Protein sequence | MNMEEIVALS VKHNVSDLHL CSAWPARWRI RGRMEAAPFD APDVEELLRE WLDDDQRAIL
LENGQLDFAV SLAENQRLRG SAFAQRHGIS LALRLLPSHC PQLEQLGAPT VLPELLKSEN
GLILVTGATG SGKSTTLAAM VGYLNQHADA HILTLEDPVE YLYASQRCLI QQREIGLHCM
TFASGLRAAL REDPDVILLG ELRDSETIRL ALTAAETGHL VLATLHTRGA AQSVERLVDS
FPAQEKDPVR NQLAGSLRAV LSQKLEVDKQ EGRVALFELL INTPAVGNLI REGKTHQLPH
VIQTGQQVGM ITFQQSYQHR VGEGRL
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