| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_02674 |
|---|
| Symbol | ssnA |
|---|
| ID | 8116385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | + |
|---|
| Start bp | 2849230 |
|---|
| End bp | 2850558 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644848870 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003000443 |
|---|
| Protein GI | 251786139 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | [TIGR03314] putative selenium metabolism protein SsnA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATTC TGAAGAATGT CACTGCGGTA CAGCTACACC CGGCAAAAGT GCAGGAAGGC
GTTGATATCG CCATCGAAAA CGATGTGATT GTCGCTATCG GCGATGCCCT GACGCAACGC
TACCCCGACG CCAGCTTCAA AGAGATGCAT GGCCGGATTG TGATGCCAGG GATTGTCTGC
TCGCACAACC ATTTTTACTC GGGGCTTTCC CGCGGAATTA TGGCAAACAT CGCCCCTTGC
CCGGATTTCA TCTCAACGCT GAAAAATCTC TGGTGGCGGC TCGATCGCGC CCTTGATGAA
GAGTCGCTCT ATTACAGCGG ACTGATTTGT TCCCTGGAAG CGATTAAGAG CGGATGTACA
TCGGTTATCG ATCACCATGC CTCTCCGGCG TATATCGGCG GGTCGCTCTC CACATTGCGC
GACGCATTTT TAAAAGTTGG CCTGCGCGCG ATGACCTGTT TTGAAACTAC TGACCGTAAC
AACGGCATCA AAGAGTTGCA GGAAGGTGTA GAAGAAAACA TCCGTTTCGC CCGTTTGATT
GATGAGGCGA AGAAAGCGAC AAGCGAGCCG TATCTGGTGG AAGCACATAT CGGTGCTCAC
GCGCCGTTTA CCGTGCCGGA TGCCGGTCTG GAGATGCTGC GTGAAGCCGT GAAAGCCACA
GGCCGTGGTT TGCATATTCA CGCTGCGGAA GACCTTTACG ACGTTTCCTA CAGTCACCAC
TGGTACGGCA AAGACCTGCT GGCACGACTG GCGCAATTCG ATCTCATCGA CAGCAAAACG
CTGGTCGCTC ATGGGCTGTA CTTGTCGAAA GATGACATCA CCCTACTCAA TCAGCGCGAT
GCGTTCCTGG TGCATAACGC CCGTTCAAAC ATGAACAACC ATGTCGGCTA CAACCATCAC
CTTAGCGACA TCCGCAATCT GGCGTTGGGA ACGGACGGCA TTGGTTCGGA CATGTTTGAA
GAGATGAAAT TTGCCTTCTT TAAACATCGC GATGCGGGTG GTCCGCTGTG GCCTGACAGT
TTTGCCAAAG CCCTGACTAA CGGTAACGAA CTGATGAGCC GCAACTTTGG CGCGAAATTT
GGGCTTCTGG AAGCCGGTTA CAAAGCTGAT TTAACCATTT GCGATTACAA CTCGCCGACG
CCGCTGCTGG CAGACAATAT CGCCGGGCAT ATCGCTTTCG GTATGGGCTC AGGCAGCGTT
CACAGCGTGA TGGTCAATGG TGTGATGGTC TATGAAGACC GTCAGTTTAA CTTCGATTGC
GATTCCATTT ATGCACAAGC CAGAAAAGCC GCTGCCAGTA TGTGGCGTCG GATGGATGCG
CTGGCATAA
|
|---|
| Protein sequence | MLILKNVTAV QLHPAKVQEG VDIAIENDVI VAIGDALTQR YPDASFKEMH GRIVMPGIVC
SHNHFYSGLS RGIMANIAPC PDFISTLKNL WWRLDRALDE ESLYYSGLIC SLEAIKSGCT
SVIDHHASPA YIGGSLSTLR DAFLKVGLRA MTCFETTDRN NGIKELQEGV EENIRFARLI
DEAKKATSEP YLVEAHIGAH APFTVPDAGL EMLREAVKAT GRGLHIHAAE DLYDVSYSHH
WYGKDLLARL AQFDLIDSKT LVAHGLYLSK DDITLLNQRD AFLVHNARSN MNNHVGYNHH
LSDIRNLALG TDGIGSDMFE EMKFAFFKHR DAGGPLWPDS FAKALTNGNE LMSRNFGAKF
GLLEAGYKAD LTICDYNSPT PLLADNIAGH IAFGMGSGSV HSVMVNGVMV YEDRQFNFDC
DSIYAQARKA AASMWRRMDA LA
|
|---|
| |