Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_02481 |
Symbol | gabD |
ID | 8113946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | + |
Start bp | 2630268 |
End bp | 2631716 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644848681 |
Product | hypothetical protein |
Protein accession | YP_003000254 |
Protein GI | 251785950 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTA ACGACAGTAA ATTATTCCGC CAGCAGGCGT TGATTAACGG GGAATGGCTG GACGCCAACA ATGGCGAGGT CATCGATGTC ACCAATCCGG CGAACGGCGA CAAGCTGGGT AGCGTACCCA AAATGGGCGC TGATGAAACC CGCGCCGCTA TCGACGCCGC CAACCGCGCT CTGCCCGCCT GGCGTGCGCT CACCGCCAAA GAACGCGCCA ACATTCTGCG CAACTGGTTC AATTTGTTGA TGGAGCATCA GGACGATTTA GCGCGCCTGA TGACCCTAGA ACAGGGCAAA CCGCTGGCTG AAGCGAAAGG CGAAATTAGC TACGCCGCCT CCTTTATTGA GTGGTTTGCT GAAGAAGGCA AACGCATTTA TGGCGACACC ATTCCTGGTC ATCAGGCCGA TAAGCGCCTG ATTGTTATCA AGCAGCCGAT TGGCGTCACC GCAGCTATCA CGCCGTGGAA CTTCCCGGCG GCGATGATTA CCCGCAAAGC CGGTCCGGCG CTGGCGGCAG GCTGCACCAT GGTGCTGAAG CCTGCCAGTC AGACGCCGTT CTCTGCGCTG GCGCTGGCGG AGCTGGCGAT TCGCGCGGGC ATTCCGGCTG GGGTATTTAA CGTGGTCACC GGTTCGGCGG GCGCGGTGGG TAACGAACTG ACCAGCAACC CGCTGGTGCG CAAGCTGTCG TTTACCGGTT CGACCGAAAT TGGCCGCCAG TTAATGGAAC AGTGCGCGAA AGACATCAAA AAAGTGTCGC TGGAGCTGGG CGGCAACGCG CCGTTTATCG TCTTTGACGA TGCCGACCTC GACAAAGCCG TGGAAGGTGC GCTGTCCTCG AAATTCCGCA ACGCCGGGCA AACCTGCGTC TGCGCCAACC GTTTATACGT GCAGGACGGC GTGTATGACC GCTTTGCCGA AAAATTGCAG CAGGCGGTGA GCAAATTGCA CATCGGCGAC GGGCTGGAGA AAGGCGTCAC CATCGGGCCG CTGATCGATG AAAAAGCGGT AGCAAAAGTG GAAGAGCATA TTGCCGATGC GCTGGAGAAA GGTGCGCGTG TGGTTTGCGG CGGTAAAGCG GATGAACGCG GCGGCAACTT CTTCCAGCCG ACCATTCTGG TGGACGTTCC AGCCAACGCC AAAGTGTCGA AAGAAGAGAC GTTCGGCCCC CTCGCCCCAC TGTTCCGTTT TAAAGATGAA GCCGATGTGA TTGCGCAAGC CAATGACACC GAGTTTGGCC TTGCCGCCTA TTTCTACGCC CGTGATTTAA GCCGCGTCTT CCGCGTGGGC GAAGCGCTGG AGTACGGCAT CGTCGGCATC AATACCGGCA TCATTTCCAA TGAAGTGGCC CCGTTCGGCG GCATTAAAGC CTCGGGTCTG GGTCGTGAAG GTTCGAAGTA TGGCATCGAA GATTACTTAG AAATCAAATA TATGTGCATC GGTCTTTAA
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Protein sequence | MKLNDSKLFR QQALINGEWL DANNGEVIDV TNPANGDKLG SVPKMGADET RAAIDAANRA LPAWRALTAK ERANILRNWF NLLMEHQDDL ARLMTLEQGK PLAEAKGEIS YAASFIEWFA EEGKRIYGDT IPGHQADKRL IVIKQPIGVT AAITPWNFPA AMITRKAGPA LAAGCTMVLK PASQTPFSAL ALAELAIRAG IPAGVFNVVT GSAGAVGNEL TSNPLVRKLS FTGSTEIGRQ LMEQCAKDIK KVSLELGGNA PFIVFDDADL DKAVEGALSS KFRNAGQTCV CANRLYVQDG VYDRFAEKLQ QAVSKLHIGD GLEKGVTIGP LIDEKAVAKV EEHIADALEK GARVVCGGKA DERGGNFFQP TILVDVPANA KVSKEETFGP LAPLFRFKDE ADVIAQANDT EFGLAAYFYA RDLSRVFRVG EALEYGIVGI NTGIISNEVA PFGGIKASGL GREGSKYGIE DYLEIKYMCI GL
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